Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3001G301600

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3001G301600Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25Sequence analysisAdd BLAST25
ChainiPRO_500295857226 – 282Sequence analysisAdd BLAST257

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini74 – 182Expansin-like EG45InterPro annotationAdd BLAST109
Domaini195 – 276Expansin-like CBDInterPro annotationAdd BLAST82

Sequence similaritiesi

Belongs to the expansin family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410JTCJ Eukaryota
ENOG41107Z5 LUCA
HOGENOMiHOG000220794
InParanoidiC5WSG0
OMAiPANYIAD
OrthoDBiEOG09360J2H

Family and domain databases

Gene3Di2.40.40.101 hit
2.60.40.7601 hit
InterProiView protein in InterPro
IPR007118 Expan_Lol_pI
IPR007112 Expansin/allergen_DPBB_dom
IPR007117 Expansin_CBD
IPR036749 Expansin_CBD_sf
IPR005795 LolPI
IPR009009 RlpA-like_DPBB
IPR036908 RlpA-like_sf
PfamiView protein in Pfam
PF03330 DPBB_1, 1 hit
PF01357 Pollen_allerg_1, 1 hit
PRINTSiPR01225 EXPANSNFAMLY
PR00829 LOLP1ALLERGN
SMARTiView protein in SMART
SM00837 DPBB_1, 1 hit
SUPFAMiSSF49590 SSF49590, 1 hit
SSF50685 SSF50685, 1 hit
PROSITEiView protein in PROSITE
PS50843 EXPANSIN_CBD, 1 hit
PS50842 EXPANSIN_EG45, 1 hit

Sequencei

Sequence statusi: Complete.

C5WSG0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATALSFKAA FAVAALLSVV AVTYGAPAQQ QPDLHNATDS QSQDRSLLSY
60 70 80 90 100
SSGWLPAKAT WYGAPTGAGP DDNGGACGFK GTNQYPFSSM TSCGNEPIFK
110 120 130 140 150
DGKGCGSCYQ IRCLKSNHPA CSGVPQTVII TDMNYYPVAK YHFDLSGTAF
160 170 180 190 200
GAMASWGLND KLRHAGIIDM QFRRVPCNFP GLTITFRVQH GSNPMYLAVL
210 220 230 240 250
IEHENQDGDV VQADIMQNNS GYWEPMHESW GSIWRIDPNR PLRGPFSIRI
260 270 280
TNESGKQLVA KNIIPANYVA DVDYRSYVQY TN
Length:282
Mass (Da):30,854
Last modified:September 1, 2009 - v1
Checksum:iF2B1B8F0B5231937
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000760 Genomic DNA Translation: EER94506.1
RefSeqiXP_002467508.1, XM_002467463.1

Genome annotation databases

EnsemblPlantsiEER94506; EER94506; SORBI_3001G301600
GeneIDi8058097
GrameneiEER94506; EER94506; SORBI_3001G301600
KEGGisbi:8058097

Similar proteinsi

Entry informationi

Entry nameiC5WSG0_SORBI
AccessioniPrimary (citable) accession number: C5WSG0
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: March 28, 2018
This is version 53 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported