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C5WRM9

- C5WRM9_SORBI

UniProt

C5WRM9 - C5WRM9_SORBI

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Protein
Submitted name: Putative uncharacterized protein Sb01g041700
Gene
Sb01g041700, SORBIDRAFT_01g041700
Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb01g041700Imported
Gene namesi
Name:Sb01g041700Imported
ORF Names:SORBIDRAFT_01g041700Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 1

Organism-specific databases

GrameneiC5WRM9.

Subcellular locationi

GO - Cellular componenti

  1. cytosol Source: EnsemblPlants/Gramene
  2. nucleus Source: EnsemblPlants/Gramene
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb01g041700.1.

Structurei

3D structure databases

ProteinModelPortaliC5WRM9.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiIMENCHE.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

C5WRM9-1 [UniParc]FASTAAdd to Basket

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MVLSKAVSES DMSVHSTFAS RYVRSSLPRY RMPENSIPKE AAYQIINDEL    50
MLDGNPRLNL ASFVTTWMEP ECDKLIMAAI NKNYVDMDEY PVTTELQNRC 100
VNMIAHLFNA PLGESETAVG VGTVGSSEAI MLAGLAFKRR WQNKRRAEGK 150
PFDKPNIVTG ANVQVCWEKF ARYFEVELRE VKLRDGYYVM DPEKAVEMVD 200
ENTICVAAIL GSTLNGEFED VKLLNDLLEV KNGETGWGTP IHVDAASGGF 250
IAPFLYPELE WDFRLPWVKS INVSGHKYGL VYAGIGWCIW RSKEDLPEEL 300
IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRHGFEGY RNIMENCHEN 350
AMVLKEGLEK TGRFNIVSKD EGVPLVAFSL KDRSRHDEFE ISDMLRRFGW 400
IVPAYTMPAD AQHVTVLRVV IREEFSRTLA ERLVLDIEKV MYQLDALPSR 450
IPPPPPPAQL VRKKSELETQ RSVTEAWKKF VLAKKTNGVC 490
Length:490
Mass (Da):55,681
Last modified:September 1, 2009 - v1
Checksum:iB206D5C1BA2E3592
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000760 Genomic DNA. Translation: EER95206.1.
RefSeqiXP_002468208.1. XM_002468163.1.
UniGeneiSbi.10791.

Genome annotation databases

EnsemblPlantsiSb01g041700.1; Sb01g041700.1; Sb01g041700.
GeneIDi8085236.
KEGGisbi:SORBI_01g041700.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000760 Genomic DNA. Translation: EER95206.1 .
RefSeqi XP_002468208.1. XM_002468163.1.
UniGenei Sbi.10791.

3D structure databases

ProteinModelPortali C5WRM9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 4558.Sb01g041700.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Sb01g041700.1 ; Sb01g041700.1 ; Sb01g041700 .
GeneIDi 8085236.
KEGGi sbi:SORBI_01g041700.

Organism-specific databases

Gramenei C5WRM9.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000070228.
KOi K01580.
OMAi IMENCHE.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623.

Entry informationi

Entry nameiC5WRM9_SORBI
AccessioniPrimary (citable) accession number: C5WRM9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 14, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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