C5WPF3 (C5WPF3_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb01g039500 EMBL EER95093.1

Gene names

Name:	Sb01g039500 EMBL EER95093.1
ORF Names:	SORBIDRAFT_01g039500 EMBL EER95093.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	522 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the heat shock protein 70 family. RuleBase RU003322

Ontologies

Keywords
Ligand	ATP-binding RuleBase RU003322 Nucleotide-binding
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5WPF3 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: D8B33DFA7163336C	FASTA	522	57,468
	10 20 30 40 50 60 MAAASKSDGP AVGIDLGTTY SCVAVWRHDR GEVIANDQGN RLTPSCVAFS STEKLVGEAA 70 80 90 100 110 120 VNQAALNPMN TIFEVKRLIG RRFSAESVQE DVKLWPFKVV AGSDDRPMIL VQYEGKERQF 130 140 150 160 170 180 MPEEISSMVL VKMRETAEVY LGKKIKNAVI TVPVYFNNSQ RQATIDAGAI AGLNVMRIIN 190 200 210 220 230 240 EPTAAALAYG LEKMSVSNKQ RTVLVFDLGG GTFDVSLLNI DPGTNMDKGL FEVVAIAGDT 250 260 270 280 290 300 HLGGADFDNE MVKYSLREFT RKHGKMDIHS NQKTTIEVDS LHEGIDFCTT ITRSRFEELN 310 320 330 340 350 360 KDLFSKCMKG LDKCLCDAKM DKSSIHDVVL VGGSTRIPKV QSMLRDFFCG KELCRSINPD 370 380 390 400 410 420 EAVAYGAAIQ ASILSGRTDD GRLVDMLLRE VTPLSLGIET EDNFTMSVVI PRNTAIPTKK 430 440 450 460 470 480 VRRFTTFYDN QTAVSFPVYE GESANTRDNN LLGKFKLTDV PPAPQGVPDF NVTFDIDANG 490 500 510 520 VLKVSAEDRD TGRKNSITIV NHGGRLRKEE ITHLVLKAES ER

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000760 Genomic DNA. Translation: EER95093.1.
RefSeq	XP_002468095.1. XM_002468050.1.
3D structure databases
ProteinModelPortal	C5WPF3.
ModBase	Search...
Protein-protein interaction databases
STRING	4558.Sb01g039500.1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb01g039500.1; Sb01g039500.1; Sb01g039500.
GeneID	8081498.
KEGG	sbi:SORBI_01g039500.
Organism-specific databases
Gramene	C5WPF3.
Phylogenomic databases
eggNOG	COG0443.
HOGENOM	HOG000228135.
KO	K03283.
ProtClustDB	CLSN2723596.
Family and domain databases
InterPro	IPR018181. Heat_shock_70_CS. IPR013126. Hsp_70_fam. [Graphical view]
Pfam	PF00012. HSP70. 1 hit. [Graphical view]
PRINTS	PR00301. HEATSHOCK70.
PROSITE	PS00297. HSP70_1. 1 hit. PS00329. HSP70_2. 1 hit. PS01036. HSP70_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5WPF3_SORBI

Accession

Primary (citable) accession number: C5WPF3

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	April 3, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)