C5WN22 (C5WN22_SORBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein Sb01g010210 EMBL EER90993.1

Gene names

Name:	Sb01g010210 EMBL EER90993.1
ORF Names:	SORBIDRAFT_01g010210 EMBL EER90993.1

Organism

Sorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]

Taxonomic identifier

4558 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Sorghum

Protein attributes

Sequence length	744 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	ATP synthesis coupled electron transport Inferred from electronic annotation. Source: InterPro response to oxidative stress Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Cellular_component	chloroplast Inferred from electronic annotation. Source: EnsemblPlants/Gramene mitochondrial respiratory chain complex I Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Molecular_function	NADH dehydrogenase (ubiquinone) activity Inferred from electronic annotation. Source: InterPro electron carrier activity Inferred from electronic annotation. Source: InterPro iron-sulfur cluster binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5WN22 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: F3A9A7B3AA3B0082	FASTA	744	80,675
	10 20 30 40 50 60 MAFLARALRQ SNSRLSSRCP AVAASCRWIS PTAAAGSPEA GAAVAPADPE LPPPREPVGG 70 80 90 100 110 120 ARVELPPNPE DALEVFVDGH AVRIPKGFTV LQACEVAGVD IPRFCYHSRL SIAGNCRMCL 130 140 150 160 170 180 VEVEKSPKPV ASCAMPALPG MKIKTNTPVA KKAREGVMEF LLMNHPLDCP ICDQGGECDL 190 200 210 220 230 240 QDQSMAFGAD RGRFTEMKRS VVDKNLGPLV KTVMTRCIQC TRCVRFATEV AGVQDLGMLG 250 260 270 280 290 300 RGSGEEIGTY VEKLMTSELS GNVIDICPVG ALTSKPFAFK ARNWELKGTE TIDVTDAVGS 310 320 330 340 350 360 NIRVDSRGPE VMRIVPRLNE DINEEWISDK TRFCYDGLKR QRLNDPMIRG PDGRFKAVTW 370 380 390 400 410 420 RDALAVVAEV LHQVKPEEIT GVAGKLSDAE SMMALKDFVN RMGSDKVLCE GNGPNPPADL 430 440 450 460 470 480 RSNYLMNTSI AGLEKADVFL LVGTQPRVEA AMVNARIRKT VKATQAKVGY IGPPADFNYD 490 500 510 520 530 540 HDHLGTGPQT LVEIAEGRHP FCSVLQSAKN PVIIAGAGLF EREDQDALFS TIETVAKKFN 550 560 570 580 590 600 VTRPDWNGLN VLLLHAAQAA ALDLGLVANP SESIKSAKFL YLMGADDISL DKLPDDAFVV 610 620 630 640 650 660 YQGHHGDKAV YRANVILPSS AFSEKEGTYE NTEGCTQWTI PAVPTVGDAR DDWKIIRALS 670 680 690 700 710 720 EVAGAQLPYD SLSAVRDRIS TVAPNLVHLD EREPSTISAE VKPPVKQQVS STPFKTVVEN 730 740 FYMTDAITRA SKIMAQCSAT LLKK

References

[1]

"The Sorghum bicolor genome and the diversification of grasses." Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J., Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J., Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J., Feltus F.A. , Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M., Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L., Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P., Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman M., Ware D., Westhoff P., Mayer K.F.X., Messing J., Rokhsar D.S. Nature 457:551-556(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. BTx623.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000760 Genomic DNA. Translation: EER90993.1.
RefSeq	XP_002463995.1. XM_002463950.1.
UniGene	Sbi.1823.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	4558.Sb01g010210.1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	Sb01g010210.1; Sb01g010210.1; Sb01g010210.
GeneID	8063381.
KEGG	dosa:Os03t0713400-01. sbi:SORBI_01g010210.
Organism-specific databases
Gramene	C5WN22.
Phylogenomic databases
eggNOG	COG1034.
HOGENOM	HOG000031442.
KO	K03934.
OMA	RNINSEM.
ProtClustDB	CLSN2689894.
Family and domain databases
Gene3D	3.10.20.30. 1 hit.
InterPro	IPR001041. 2Fe-2S_ferredoxin-type. IPR012675. Beta-grasp_dom. IPR006656. Mopterin_OxRdtase. IPR000283. NADH_UbQ_OxRdtase_75kDa_su_CS. IPR010228. NADH_UbQ_OxRdtase_Gsu. IPR019574. NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd. IPR015405. NuoG_C. [Graphical view]
Pfam	PF09326. DUF1982. 1 hit. PF00384. Molybdopterin. 1 hit. PF10588. NADH-G_4Fe-4S_3. 1 hit. [Graphical view]
SMART	SM00929. NADH-G_4Fe-4S_3. 1 hit. [Graphical view]
SUPFAM	SSF54292. Ferredoxin. 1 hit.
TIGRFAMs	TIGR01973. NuoG. 1 hit.
PROSITE	PS51085. 2FE2S_FER_2. 1 hit. PS00641. COMPLEX1_75K_1. 1 hit. PS00642. COMPLEX1_75K_2. 1 hit. PS00643. COMPLEX1_75K_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5WN22_SORBI

Accession

Primary (citable) accession number: C5WN22

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	April 3, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)