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C5WMY2 (C5WMY2_SORBI) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Sb01g009880 EMBL EER93555.1
ORF Names:SORBIDRAFT_01g009880 EMBL EER93555.1
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]
Taxonomic identifier4558 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum

Protein attributes

Sequence length493 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C5WMY2 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 4BD19B291B2BFBF2

FASTA49355,161
        10         20         30         40         50         60 
MVLSHGVGGS DESVHSTFAS RYVRASLPRF RMPEQSIPKE AAYQIINDEL MLDGNPRLNL 

        70         80         90        100        110        120 
ASFVTTWMEP ECDKLIQASV NKNYVDMDEY PVTTELQNRC VNMIAHLFNA PLGDSETAVG 

       130        140        150        160        170        180 
VGTVGSSEAI MLAGLAFKRR WQNKMKAAGK PCDKPNIVTG ANVQVCWEKF ARYFEVELKE 

       190        200        210        220        230        240 
VKLSDGYYVM DPQKAVDMVD ENTICVAAIL GSTLNGEFED VKLLNDLLTK KNAETGWDTP 

       250        260        270        280        290        300 
IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWCIW RSKEDLPEEL 

       310        320        330        340        350        360 
IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY KNIMENCQEN AMVLKQGLEK 

       370        380        390        400        410        420 
TGKFNIVSKD NGVPLVAFSL KDSSRHNEFE ISDFLRRFGW IVPAYTMPPD AQHVTVLRVV 

       430        440        450        460        470        480 
IREDFSRTLA ERLVLDIEKV LHELDALPAR VPSGDLAALA AAEASEKAME KQREVISLWK 

       490 
RAVLAKKKTN GVC 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000760 Genomic DNA. Translation: EER93555.1.
RefSeqXP_002466557.1. XM_002466512.1.
UniGeneSbi.2822.

3D structure databases

ProteinModelPortalC5WMY2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4558.Sb01g009880.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSb01g009880.1; Sb01g009880.1; Sb01g009880.
GeneID8063364.
KEGGsbi:SORBI_01g009880.

Organism-specific databases

GrameneC5WMY2.

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
ProtClustDBCLSN2683665.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC5WMY2_SORBI
AccessionPrimary (citable) accession number: C5WMY2
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: March 19, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)