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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3001G397000

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3001G397000Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 1

Subcellular locationi

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb01g037570.1.

Structurei

3D structure databases

ProteinModelPortaliC5WMI0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini63 – 357Lyase_1InterPro annotationAdd BLAST295
Domaini420 – 488ASL_C2InterPro annotationAdd BLAST69

Phylogenomic databases

eggNOGiKOG1316. Eukaryota.
COG0165. LUCA.
HOGENOMiHOG000242744.
InParanoidiC5WMI0.
KOiK01755.
OMAiSIMPHKK.
OrthoDBiEOG093607FL.

Family and domain databases

CDDicd01359. Argininosuccinate_lyase. 1 hit.
Gene3Di1.10.275.10. 1 hit.
HAMAPiMF_00006. Arg_succ_lyase. 1 hit.
InterProiView protein in InterPro
IPR029419. Arg_succ_lyase_C.
IPR009049. Argininosuccinate_lyase.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
PANTHERiPTHR43814. PTHR43814. 1 hit.
PfamiView protein in Pfam
PF14698. ASL_C2. 1 hit.
PF00206. Lyase_1. 1 hit.
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00838. argH. 1 hit.
PROSITEiView protein in PROSITE
PS00163. FUMARATE_LYASES. 1 hit.

Sequencei

Sequence statusi: Complete.

C5WMI0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFTSQSLIF RAAASPPCPR IAPSPGRVTL RDHRAAFPPL AAASTSMASS
60 70 80 90 100
ESEDKREAKL WGGRFEEGVT DAVERFTESI SYDWQLYKYD IMGSKAHASM
110 120 130 140 150
LAGQGLITAT DRDIILEGLD QIERLIQEGK FEWRKDREDV HMNIEAALIE
160 170 180 190 200
RVGEPAKKLH TARSRNDQIV TDLRLWCRDA IDKILIRIKQ LQVSLVILAS
210 220 230 240 250
KYVDLIVPGY THLQRAQPVL LPHLLLSYVE QLERDAGRLV NCRERVNFCP
260 270 280 290 300
LGACALAGTG LPIDRFQTAK DLKFTAPMKN SIDAVSDRDF VLEFLAANSI
310 320 330 340 350
AAVHLSRIGE EWVLWASEEF GFLTPSDKVS TGSSIMPQKK NPDPMELVRG
360 370 380 390 400
KSARVVGDLM TVLTLCKGLP QAYNRDLQED KEPLFDSVKA VLGMLEVCTE
410 420 430 440 450
FAQNISFNSK RIQSSLPAGY LDATTLADYL VKKGIPFRTS HEIVGRSVAL
460 470 480 490 500
CVYKQCQLAE LELDDLKSVH PVFEGDVYEY LGVENAVNKF ISYGSTGSEQ
510
VKKQLEDWRI QLGISS
Length:516
Mass (Da):57,555
Last modified:September 1, 2009 - v1
Checksum:i7500A8DE322093EF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000760 Genomic DNA. Translation: EER94983.1.
RefSeqiXP_002467985.1. XM_002467940.1.

Genome annotation databases

EnsemblPlantsiEER94983; EER94983; SORBI_001G397000.
GeneIDi8081084.
GrameneiEER94983; EER94983; SORBI_001G397000.
KEGGisbi:8081084.

Similar proteinsi

Entry informationi

Entry nameiC5WMI0_SORBI
AccessioniPrimary (citable) accession number: C5WMI0
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: November 22, 2017
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported