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C5WMI0

- C5WMI0_SORBI

UniProt

C5WMI0 - C5WMI0_SORBI

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Protein
Submitted name: Putative uncharacterized protein Sb01g037570
Gene
Sb01g037570, SORBIDRAFT_01g037570
Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. argininosuccinate lyase activity Source: InterPro

GO - Biological processi

  1. arginine biosynthetic process via ornithine Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb01g037570Imported
Gene namesi
Name:Sb01g037570Imported
ORF Names:SORBIDRAFT_01g037570Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768: Chromosome 1

Organism-specific databases

GrameneiC5WMI0.

Subcellular locationi

GO - Cellular componenti

  1. chloroplast stroma Source: EnsemblPlants/Gramene
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb01g037570.1.

Structurei

3D structure databases

ProteinModelPortaliC5WMI0.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0165.
HOGENOMiHOG000242744.
KOiK01755.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
HAMAPiMF_00006. Arg_succ_lyase.
InterProiIPR029419. Arg_succ_lyase_C.
IPR009049. Argininosuccinate_lyase.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PTHR11444:SF3. PTHR11444:SF3. 1 hit.
PfamiPF14698. ASL_C2. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00838. argH. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5WMI0-1 [UniParc]FASTAAdd to Basket

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MAFTSQSLIF RAAASPPCPR IAPSPGRVTL RDHRAAFPPL AAASTSMASS    50
ESEDKREAKL WGGRFEEGVT DAVERFTESI SYDWQLYKYD IMGSKAHASM 100
LAGQGLITAT DRDIILEGLD QIERLIQEGK FEWRKDREDV HMNIEAALIE 150
RVGEPAKKLH TARSRNDQIV TDLRLWCRDA IDKILIRIKQ LQVSLVILAS 200
KYVDLIVPGY THLQRAQPVL LPHLLLSYVE QLERDAGRLV NCRERVNFCP 250
LGACALAGTG LPIDRFQTAK DLKFTAPMKN SIDAVSDRDF VLEFLAANSI 300
AAVHLSRIGE EWVLWASEEF GFLTPSDKVS TGSSIMPQKK NPDPMELVRG 350
KSARVVGDLM TVLTLCKGLP QAYNRDLQED KEPLFDSVKA VLGMLEVCTE 400
FAQNISFNSK RIQSSLPAGY LDATTLADYL VKKGIPFRTS HEIVGRSVAL 450
CVYKQCQLAE LELDDLKSVH PVFEGDVYEY LGVENAVNKF ISYGSTGSEQ 500
VKKQLEDWRI QLGISS 516
Length:516
Mass (Da):57,555
Last modified:September 1, 2009 - v1
Checksum:i7500A8DE322093EF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000760 Genomic DNA. Translation: EER94983.1.
RefSeqiXP_002467985.1. XM_002467940.1.
UniGeneiSbi.6257.

Genome annotation databases

EnsemblPlantsiSb01g037570.1; Sb01g037570.1; Sb01g037570.
GeneIDi8081084.
KEGGisbi:SORBI_01g037570.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CM000760 Genomic DNA. Translation: EER94983.1 .
RefSeqi XP_002467985.1. XM_002467940.1.
UniGenei Sbi.6257.

3D structure databases

ProteinModelPortali C5WMI0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 4558.Sb01g037570.1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi Sb01g037570.1 ; Sb01g037570.1 ; Sb01g037570 .
GeneIDi 8081084.
KEGGi sbi:SORBI_01g037570.

Organism-specific databases

Gramenei C5WMI0.

Phylogenomic databases

eggNOGi COG0165.
HOGENOMi HOG000242744.
KOi K01755.

Family and domain databases

Gene3Di 1.10.275.10. 1 hit.
HAMAPi MF_00006. Arg_succ_lyase.
InterProi IPR029419. Arg_succ_lyase_C.
IPR009049. Argininosuccinate_lyase.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view ]
PANTHERi PTHR11444. PTHR11444. 1 hit.
PTHR11444:SF3. PTHR11444:SF3. 1 hit.
Pfami PF14698. ASL_C2. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view ]
PRINTSi PR00149. FUMRATELYASE.
SUPFAMi SSF48557. SSF48557. 1 hit.
TIGRFAMsi TIGR00838. argH. 1 hit.
PROSITEi PS00163. FUMARATE_LYASES. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623.

Entry informationi

Entry nameiC5WMI0_SORBI
AccessioniPrimary (citable) accession number: C5WMI0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: June 11, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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