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C5WMI0

- C5WMI0_SORBI

UniProt

C5WMI0 - C5WMI0_SORBI

Protein
Submitted name:

Putative uncharacterized protein Sb01g037570

Gene

Sb01g037570

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 35 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. argininosuccinate lyase activity Source: InterPro

    GO - Biological processi

    1. arginine biosynthetic process via ornithine Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized protein Sb01g037570Imported
    Gene namesi
    Name:Sb01g037570Imported
    ORF Names:SORBIDRAFT_01g037570Imported
    OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
    Taxonomic identifieri4558 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
    ProteomesiUP000000768: Chromosome 1

    Organism-specific databases

    GrameneiC5WMI0.

    Subcellular locationi

    GO - Cellular componenti

    1. chloroplast stroma Source: EnsemblPlants/Gramene

    Interactioni

    Protein-protein interaction databases

    STRINGi4558.Sb01g037570.1.

    Structurei

    3D structure databases

    ProteinModelPortaliC5WMI0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0165.
    HOGENOMiHOG000242744.
    KOiK01755.

    Family and domain databases

    Gene3Di1.10.275.10. 1 hit.
    HAMAPiMF_00006. Arg_succ_lyase.
    InterProiIPR029419. Arg_succ_lyase_C.
    IPR009049. Argininosuccinate_lyase.
    IPR024083. Fumarase/histidase_N.
    IPR020557. Fumarate_lyase_CS.
    IPR000362. Fumarate_lyase_fam.
    IPR022761. Fumarate_lyase_N.
    IPR008948. L-Aspartase-like.
    [Graphical view]
    PANTHERiPTHR11444. PTHR11444. 1 hit.
    PTHR11444:SF3. PTHR11444:SF3. 1 hit.
    PfamiPF14698. ASL_C2. 1 hit.
    PF00206. Lyase_1. 1 hit.
    [Graphical view]
    PRINTSiPR00149. FUMRATELYASE.
    SUPFAMiSSF48557. SSF48557. 1 hit.
    TIGRFAMsiTIGR00838. argH. 1 hit.
    PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5WMI0-1 [UniParc]FASTAAdd to Basket

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    MAFTSQSLIF RAAASPPCPR IAPSPGRVTL RDHRAAFPPL AAASTSMASS    50
    ESEDKREAKL WGGRFEEGVT DAVERFTESI SYDWQLYKYD IMGSKAHASM 100
    LAGQGLITAT DRDIILEGLD QIERLIQEGK FEWRKDREDV HMNIEAALIE 150
    RVGEPAKKLH TARSRNDQIV TDLRLWCRDA IDKILIRIKQ LQVSLVILAS 200
    KYVDLIVPGY THLQRAQPVL LPHLLLSYVE QLERDAGRLV NCRERVNFCP 250
    LGACALAGTG LPIDRFQTAK DLKFTAPMKN SIDAVSDRDF VLEFLAANSI 300
    AAVHLSRIGE EWVLWASEEF GFLTPSDKVS TGSSIMPQKK NPDPMELVRG 350
    KSARVVGDLM TVLTLCKGLP QAYNRDLQED KEPLFDSVKA VLGMLEVCTE 400
    FAQNISFNSK RIQSSLPAGY LDATTLADYL VKKGIPFRTS HEIVGRSVAL 450
    CVYKQCQLAE LELDDLKSVH PVFEGDVYEY LGVENAVNKF ISYGSTGSEQ 500
    VKKQLEDWRI QLGISS 516
    Length:516
    Mass (Da):57,555
    Last modified:September 1, 2009 - v1
    Checksum:i7500A8DE322093EF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000760 Genomic DNA. Translation: EER94983.1.
    RefSeqiXP_002467985.1. XM_002467940.1.
    UniGeneiSbi.6257.

    Genome annotation databases

    EnsemblPlantsiSb01g037570.1; Sb01g037570.1; Sb01g037570.
    GeneIDi8081084.
    KEGGisbi:SORBI_01g037570.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CM000760 Genomic DNA. Translation: EER94983.1 .
    RefSeqi XP_002467985.1. XM_002467940.1.
    UniGenei Sbi.6257.

    3D structure databases

    ProteinModelPortali C5WMI0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 4558.Sb01g037570.1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi Sb01g037570.1 ; Sb01g037570.1 ; Sb01g037570 .
    GeneIDi 8081084.
    KEGGi sbi:SORBI_01g037570.

    Organism-specific databases

    Gramenei C5WMI0.

    Phylogenomic databases

    eggNOGi COG0165.
    HOGENOMi HOG000242744.
    KOi K01755.

    Family and domain databases

    Gene3Di 1.10.275.10. 1 hit.
    HAMAPi MF_00006. Arg_succ_lyase.
    InterProi IPR029419. Arg_succ_lyase_C.
    IPR009049. Argininosuccinate_lyase.
    IPR024083. Fumarase/histidase_N.
    IPR020557. Fumarate_lyase_CS.
    IPR000362. Fumarate_lyase_fam.
    IPR022761. Fumarate_lyase_N.
    IPR008948. L-Aspartase-like.
    [Graphical view ]
    PANTHERi PTHR11444. PTHR11444. 1 hit.
    PTHR11444:SF3. PTHR11444:SF3. 1 hit.
    Pfami PF14698. ASL_C2. 1 hit.
    PF00206. Lyase_1. 1 hit.
    [Graphical view ]
    PRINTSi PR00149. FUMRATELYASE.
    SUPFAMi SSF48557. SSF48557. 1 hit.
    TIGRFAMsi TIGR00838. argH. 1 hit.
    PROSITEi PS00163. FUMARATE_LYASES. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. BTx623Imported.

    Entry informationi

    Entry nameiC5WMI0_SORBI
    AccessioniPrimary (citable) accession number: C5WMI0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3