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C5WMI0 (C5WMI0_SORBI) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Sb01g037570 EMBL EER94983.1
ORF Names:SORBIDRAFT_01g037570 EMBL EER94983.1
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare) [Reference proteome]
Taxonomic identifier4558 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum

Protein attributes

Sequence length516 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processarginine biosynthetic process via ornithine

Inferred from electronic annotation. Source: InterPro

   Cellular_componentchloroplast stroma

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionargininosuccinate lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5WMI0 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 7500A8DE322093EF

FASTA51657,555
        10         20         30         40         50         60 
MAFTSQSLIF RAAASPPCPR IAPSPGRVTL RDHRAAFPPL AAASTSMASS ESEDKREAKL 

        70         80         90        100        110        120 
WGGRFEEGVT DAVERFTESI SYDWQLYKYD IMGSKAHASM LAGQGLITAT DRDIILEGLD 

       130        140        150        160        170        180 
QIERLIQEGK FEWRKDREDV HMNIEAALIE RVGEPAKKLH TARSRNDQIV TDLRLWCRDA 

       190        200        210        220        230        240 
IDKILIRIKQ LQVSLVILAS KYVDLIVPGY THLQRAQPVL LPHLLLSYVE QLERDAGRLV 

       250        260        270        280        290        300 
NCRERVNFCP LGACALAGTG LPIDRFQTAK DLKFTAPMKN SIDAVSDRDF VLEFLAANSI 

       310        320        330        340        350        360 
AAVHLSRIGE EWVLWASEEF GFLTPSDKVS TGSSIMPQKK NPDPMELVRG KSARVVGDLM 

       370        380        390        400        410        420 
TVLTLCKGLP QAYNRDLQED KEPLFDSVKA VLGMLEVCTE FAQNISFNSK RIQSSLPAGY 

       430        440        450        460        470        480 
LDATTLADYL VKKGIPFRTS HEIVGRSVAL CVYKQCQLAE LELDDLKSVH PVFEGDVYEY 

       490        500        510 
LGVENAVNKF ISYGSTGSEQ VKKQLEDWRI QLGISS 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM000760 Genomic DNA. Translation: EER94983.1.
RefSeqXP_002467985.1. XM_002467940.1.
UniGeneSbi.6257.

3D structure databases

ProteinModelPortalC5WMI0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4558.Sb01g037570.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsSb01g037570.1; Sb01g037570.1; Sb01g037570.
GeneID8081084.
KEGGsbi:SORBI_01g037570.

Organism-specific databases

GrameneC5WMI0.

Phylogenomic databases

eggNOGCOG0165.
HOGENOMHOG000242744.
KOK01755.
OMAPTANSLD.
ProtClustDBPLN02646.

Family and domain databases

Gene3D1.10.275.10. 1 hit.
HAMAPMF_00006. Arg_succ_lyase.
InterProIPR009049. Argininosuccinate_lyase.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERPTHR11444. PTHR11444. 1 hit.
PTHR11444:SF3. PTHR11444:SF3. 1 hit.
PfamPF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00149. FUMRATELYASE.
SUPFAMSSF48557. SSF48557. 1 hit.
TIGRFAMsTIGR00838. argH. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5WMI0_SORBI
AccessionPrimary (citable) accession number: C5WMI0
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: March 19, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)