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Protein
Submitted name:

Putative uncharacterized protein Sb01g037570

Gene

Sb01g037570

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein Sb01g037570Imported
Gene namesi
Name:Sb01g037570Imported
ORF Names:SORBIDRAFT_01g037570Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeSorghum
ProteomesiUP000000768 Componenti: Chromosome 1

Organism-specific databases

GrameneiC5WMI0.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi4558.Sb01g037570.1.

Structurei

3D structure databases

ProteinModelPortaliC5WMI0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0165.
HOGENOMiHOG000242744.
InParanoidiC5WMI0.
KOiK01755.
OMAiATDFRLW.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
HAMAPiMF_00006. Arg_succ_lyase.
InterProiIPR029419. Arg_succ_lyase_C.
IPR009049. Argininosuccinate_lyase.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PTHR11444:SF3. PTHR11444:SF3. 1 hit.
PfamiPF14698. ASL_C2. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00838. argH. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5WMI0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFTSQSLIF RAAASPPCPR IAPSPGRVTL RDHRAAFPPL AAASTSMASS
60 70 80 90 100
ESEDKREAKL WGGRFEEGVT DAVERFTESI SYDWQLYKYD IMGSKAHASM
110 120 130 140 150
LAGQGLITAT DRDIILEGLD QIERLIQEGK FEWRKDREDV HMNIEAALIE
160 170 180 190 200
RVGEPAKKLH TARSRNDQIV TDLRLWCRDA IDKILIRIKQ LQVSLVILAS
210 220 230 240 250
KYVDLIVPGY THLQRAQPVL LPHLLLSYVE QLERDAGRLV NCRERVNFCP
260 270 280 290 300
LGACALAGTG LPIDRFQTAK DLKFTAPMKN SIDAVSDRDF VLEFLAANSI
310 320 330 340 350
AAVHLSRIGE EWVLWASEEF GFLTPSDKVS TGSSIMPQKK NPDPMELVRG
360 370 380 390 400
KSARVVGDLM TVLTLCKGLP QAYNRDLQED KEPLFDSVKA VLGMLEVCTE
410 420 430 440 450
FAQNISFNSK RIQSSLPAGY LDATTLADYL VKKGIPFRTS HEIVGRSVAL
460 470 480 490 500
CVYKQCQLAE LELDDLKSVH PVFEGDVYEY LGVENAVNKF ISYGSTGSEQ
510
VKKQLEDWRI QLGISS
Length:516
Mass (Da):57,555
Last modified:September 1, 2009 - v1
Checksum:i7500A8DE322093EF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000760 Genomic DNA. Translation: EER94983.1.
RefSeqiXP_002467985.1. XM_002467940.1.
UniGeneiSbi.6257.

Genome annotation databases

EnsemblPlantsiSb01g037570.1; Sb01g037570.1; Sb01g037570.
GeneIDi8081084.
KEGGisbi:SORBI_01g037570.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000760 Genomic DNA. Translation: EER94983.1.
RefSeqiXP_002467985.1. XM_002467940.1.
UniGeneiSbi.6257.

3D structure databases

ProteinModelPortaliC5WMI0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4558.Sb01g037570.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiSb01g037570.1; Sb01g037570.1; Sb01g037570.
GeneIDi8081084.
KEGGisbi:SORBI_01g037570.

Organism-specific databases

GrameneiC5WMI0.

Phylogenomic databases

eggNOGiCOG0165.
HOGENOMiHOG000242744.
InParanoidiC5WMI0.
KOiK01755.
OMAiATDFRLW.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
HAMAPiMF_00006. Arg_succ_lyase.
InterProiIPR029419. Arg_succ_lyase_C.
IPR009049. Argininosuccinate_lyase.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PTHR11444:SF3. PTHR11444:SF3. 1 hit.
PfamiPF14698. ASL_C2. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00838. argH. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. BTx623Imported.

Entry informationi

Entry nameiC5WMI0_SORBI
AccessioniPrimary (citable) accession number: C5WMI0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 27, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.