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C5WIH9 (C5WIH9_STRDG) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length724 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C5WIH9 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 838E929DC4FE000B

FASTA72480,343
        10         20         30         40         50         60 
MITIKNPKIL KWLKYVLGAI LSLTILVIVI GGLLFAFYIS SAPKLSEAEL KSTNSSLVYD 

        70         80         90        100        110        120 
GNNNLIADLG SEKRENVTAD SIPINLVNAI TSIEDKRFFN HRGVDLYRIF GAAFHNLTSK 

       130        140        150        160        170        180 
TTQGGSTLDQ QLIKLAYFST NESDQTLKRK AQEVWLALQM ERKYTKQEIL TFYINKVYMG 

       190        200        210        220        230        240 
NGNYGMLTAA KSYYGKDLKD LSYAQLALLA GIPQAPSQYD PYTQPEAAQN RRNIVLQQMY 

       250        260        270        280        290        300 
MEKNITKAEY EAALATPVAD GLQPLQQRST YPKYMDNYLK QVIGEVKKET NKDIFTSGLK 

       310        320        330        340        350        360 
VYTNIIPEAQ QTLYNIYNSE DYVYYPDKDF QVASTIVDVT NGHVIAQLGG RNQDENVSFG 

       370        380        390        400        410        420 
TNQAVLTDRD WGSTMKPITD YAPAIESGAY NSTAQSTNDS VYYWPGTTTQ LYNWDRKYNG 

       430        440        450        460        470        480 
WMTIQSALML SRNVPAVKAL DAAGLDYARS FLSGLGINYP EMHYSNAISS NNSSSEAKYG 

       490        500        510        520        530        540 
ASSEKMAAAY AAFANGGIYY KPQYVNKIEF SDGTSKVFEE KGKRAMKETT AYMMTDMLKT 

       550        560        570        580        590        600 
VLTYGTGTAA AIPGVAQAGK TGTSNYTDEE LAKIGEKYGL YPDYVGTMAP DENFVGYTNQ 

       610        620        630        640        650        660 
YAMAVWTGYK NRLTPVYGYG LEIAADVYRN MMTYLTNGYS EDWTMPSGLY RSGGFLYLSG 

       670        680        690        700        710        720 
TYASNNDYTN SVYNNLYGNN TSTSSSQSSS DDSTDSTDAT DANTSTNTEN GAEHSANEDK 


KTNH 

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References

[1]"Complete genome sequencing and analysis of a Lancefield group G Streptococcus dysgalactiae subsp. equisimilis strain causing streptococcal toxic shock syndrome (STSS)."
Shimomura Y., Okumura K., Murayama S.Y., Yagi J., Ubukata K., Kirikae T., Miyoshi-Akiyama T.
BMC Genomics 12:17-17(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GGS_124 EMBL BAH82194.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP010935 Genomic DNA. Translation: BAH82194.1.
RefSeqYP_002997408.1. NC_012891.1.

3D structure databases

ProteinModelPortalC5WIH9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING486410.SDEG_1711.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAH82194; BAH82194; SDEG_1711.
GeneID8111039.
KEGGsds:SDEG_1711.
PATRIC19643718. VBIStrDys95162_1684.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0744.
HOGENOMHOG000041140.
KOK05366.
OMAIYNTDEY.
OrthoDBEOG6CGCKC.
ProtClustDBCLSK877241.

Enzyme and pathway databases

BioCycSDYS486410:GHH8-1709-MONOMER.

Family and domain databases

Gene3D3.40.710.10. 1 hit.
InterProIPR012338. Beta-lactam/transpept-like.
IPR001264. Glyco_trans_51.
IPR023346. Lysozyme-like_dom.
IPR011816. PBP_1a.
IPR001460. PCN-bd_Tpept.
[Graphical view]
PfamPF00912. Transgly. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view]
SUPFAMSSF53955. SSF53955. 1 hit.
SSF56601. SSF56601. 2 hits.
TIGRFAMsTIGR02074. PBP_1a_fam. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC5WIH9_STRDG
AccessionPrimary (citable) accession number: C5WIH9
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: November 13, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)