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Protein

Ribosomal RNA small subunit methyltransferase B

Gene

sunL

Organism
Streptococcus dysgalactiae subsp. equisimilis (strain GGS_124)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationImported, Transferase

Keywords - Biological processi

rRNA processingSAAS annotation

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Enzyme and pathway databases

BioCyciSDYS486410:GHH8-1691-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase BSAAS annotation (EC:2.1.1.-SAAS annotation)
Gene namesi
Name:sunLImported
Ordered Locus Names:SDEG_1693Imported
OrganismiStreptococcus dysgalactiae subsp. equisimilis (strain GGS_124)Imported
Taxonomic identifieri486410 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
Proteomesi
  • UP000002732 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliC5WIG1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini174 – 451278SAM_MT_RSMB_NOPInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiEOG6091D0.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5WIG1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALVENLKWV ISLADNWKIS IRGKALLTLE HIFDQGAYTN IALNQQLSNK
60 70 80 90 100
ALSTKDRALL TEIVYGTVSR KISLEWYLAH YVKDRDKLDK WVYYLLMLSL
110 120 130 140 150
YQLIYLDKLP AHAIVNDAVG IAKNRGNKKG AEKFVNAILR QFTSHPLPDM
160 170 180 190 200
GTIKRRNKYY SVKYSLPVWL VKKLEDQFGS DRSVAIMESL FVRSKASIRV
210 220 230 240 250
TDPLKLEKIA EDLDAERSLL SATGLTKASG HFAASDYFTN GDITIQDESS
260 270 280 290 300
QLVAPTLNID GDEIILDACS APGGKTSHIA SYLKTGKVIA LDLYDHKLEL
310 320 330 340 350
VKENANRLGV ADNIETRKLD AREVHRHFEK DSFDKILVDA PCSGIGLIRR
360 370 380 390 400
KPDIKYNKES QDFNALQAIQ LEILSSVCQT LRKGGIITYS TCTIFDEENR
410 420 430 440 450
QVIEAFLQSH PNFEQVKLNH TQADIVKDGY LIITPEQYQT DGFFIGQVRR

VL
Length:452
Mass (Da):51,086
Last modified:September 1, 2009 - v1
Checksum:iE9B7421D30A75481
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010935 Genomic DNA. Translation: BAH82176.1.

Genome annotation databases

EnsemblBacteriaiBAH82176; BAH82176; SDEG_1693.
KEGGisds:SDEG_1693.
PATRICi19643680. VBIStrDys95162_1665.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010935 Genomic DNA. Translation: BAH82176.1.

3D structure databases

ProteinModelPortaliC5WIG1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAH82176; BAH82176; SDEG_1693.
KEGGisds:SDEG_1693.
PATRICi19643680. VBIStrDys95162_1665.

Phylogenomic databases

HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiEOG6091D0.

Enzyme and pathway databases

BioCyciSDYS486410:GHH8-1691-MONOMER.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequencing and analysis of a Lancefield group G Streptococcus dysgalactiae subsp. equisimilis strain causing streptococcal toxic shock syndrome (STSS)."
    Shimomura Y., Okumura K., Murayama S.Y., Yagi J., Ubukata K., Kirikae T., Miyoshi-Akiyama T.
    BMC Genomics 12:17-17(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GGS_124Imported.

Entry informationi

Entry nameiC5WIG1_STRDG
AccessioniPrimary (citable) accession number: C5WIG1
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: May 11, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.