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C5WFG2 (C5WFG2_STRDG) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding25 – 328GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding90 – 945GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding145 – 1484GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
C5WFG2 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 4CA833CC5583B204

FASTA40444,617
        10         20         30         40         50         60 
MEAFPKMAKE KYDRSKPHVN IGTIGHVDHG KTTLTAAITT VLARRLPTSV NQPKDYASID 

        70         80         90        100        110        120 
AAPEERERGI TINTAHVEYE TETRHYAHID APGHADYVKN MITGAAQMDG AILVVASTDG 

       130        140        150        160        170        180 
PMPQTREHIL LSRQVGVKHL IVFMNKVDLV DDEELLELVE MEIRDLLSEY DFPGDDLPVI 

       190        200        210        220        230        240 
QGSALKALEG DSKYEDIIME LMSTVDEYIP EPERDTDKPL LLPVEDVFSI TGRGTVASGR 

       250        260        270        280        290        300 
IDRGTVRVND EIEIVGIKEE TKKAVVTGVE MFRKQLDEGL AGDNVGILLR GVQRDEIERG 

       310        320        330        340        350        360 
QVIAKPGSIN PHTKFKGEVY ILSKDEGGRH TPFFNNYRPQ FYFRTTDVTG SIELPAGTEM 

       370        380        390        400 
VMPGDNVTIN VELIHPIAVE QGTTFSIREG GRTVGSGIVS EIEA 

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References

[1]"Complete genome sequencing and analysis of a Lancefield group G Streptococcus dysgalactiae subsp. equisimilis strain causing streptococcal toxic shock syndrome (STSS)."
Shimomura Y., Okumura K., Murayama S.Y., Yagi J., Ubukata K., Kirikae T., Miyoshi-Akiyama T.
BMC Genomics 12:17-17(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GGS_124 EMBL BAH81127.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP010935 Genomic DNA. Translation: BAH81127.1.
RefSeqYP_002996341.1. NC_012891.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING486410.SDEG_0625.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAH81127; BAH81127; SDEG_0625.
GeneID8112223.
KEGGsds:SDEG_0625.
PATRIC19641497. VBIStrDys95162_0590.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
OMARITISCE.
OrthoDBEOG6R5C6X.

Enzyme and pathway databases

BioCycSDYS486410:GHH8-624-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5WFG2_STRDG
AccessionPrimary (citable) accession number: C5WFG2
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: June 11, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)