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Protein

Alpha-amylase

Gene

amyE

Organism
Streptococcus dysgalactiae subsp. equisimilis (strain GGS_124)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciSDYS486410:GHH8-324-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:amyEImported
Ordered Locus Names:SDEG_0325Imported
OrganismiStreptococcus dysgalactiae subsp. equisimilis (strain GGS_124)Imported
Taxonomic identifieri486410 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000002732 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi486410.SDEG_0325.

Structurei

3D structure databases

ProteinModelPortaliC5WEL9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000008732.
KOiK01176.
OMAiNYANDSE.
OrthoDBiEOG6F55CH.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

C5WEL9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVAQKTKGLF TKLSIAGLIF GLSNTSLVPL ISTQVVSAES NQIAMKDGAI
60 70 80 90 100
LHAWCWSFNT IKQNMKAIKD ADYTSIQTSP INAVIPGDNG SKDLKNWYFH
110 120 130 140 150
YQPTDYTIGN YQLGTEDEFK AMAAEADKYG INIIVDAVLN HTTTDINAVS
160 170 180 190 200
EKIKAIPDWT HGNQGITNDY DRYQVTQHAL LGLYDLNTQN KAVQEYLLNY
210 220 230 240 250
LKQAVADGAD GFRFDAAKYI ELPGEFNSDF WTNILANSGA KFQYGEVLQG
260 270 280 290 300
AASRESDYGK LMGVTASHYG EFIRKVIGQG YVKDGDLVNY QVPGVSEDNL
310 320 330 340 350
ITWVESHDNY ANDSEESTKL TDQDIILGWS IIGARKEGVP LFFSRPVGGG
360 370 380 390 400
GQHGRFPGTT KIGDAGSDLF KDPTIVAINK FRNAMNGQSE YTRNPNMDQG
410 420 430 440 450
LVMIERGGKG AVITNLTSEE KRIHSETTLA DGQYKDTITG HIFEVSNKQI
460
SGKMAPRTVA VLYPITQ
Length:467
Mass (Da):51,394
Last modified:September 1, 2009 - v1
Checksum:iFBB13FBA41776C61
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010935 Genomic DNA. Translation: BAH80834.1.
RefSeqiWP_012766561.1. NC_012891.1.
YP_002996048.1. NC_012891.1.

Genome annotation databases

EnsemblBacteriaiBAH80834; BAH80834; SDEG_0325.
KEGGisds:SDEG_0325.
PATRICi19640865. VBIStrDys95162_0281.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010935 Genomic DNA. Translation: BAH80834.1.
RefSeqiWP_012766561.1. NC_012891.1.
YP_002996048.1. NC_012891.1.

3D structure databases

ProteinModelPortaliC5WEL9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi486410.SDEG_0325.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAH80834; BAH80834; SDEG_0325.
KEGGisds:SDEG_0325.
PATRICi19640865. VBIStrDys95162_0281.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000008732.
KOiK01176.
OMAiNYANDSE.
OrthoDBiEOG6F55CH.

Enzyme and pathway databases

BioCyciSDYS486410:GHH8-324-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequencing and analysis of a Lancefield group G Streptococcus dysgalactiae subsp. equisimilis strain causing streptococcal toxic shock syndrome (STSS)."
    Shimomura Y., Okumura K., Murayama S.Y., Yagi J., Ubukata K., Kirikae T., Miyoshi-Akiyama T.
    BMC Genomics 12:17-17(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GGS_124Imported.

Entry informationi

Entry nameiC5WEL9_STRDG
AccessioniPrimary (citable) accession number: C5WEL9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: April 29, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.