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C5W008 (C5W008_STRSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tufA EMBL CAR45081.1
Synonyms:tuf HAMAP-Rule MF_00118
Ordered Locus Names:SSU0482 EMBL CAR45081.1
OrganismStreptococcus suis (strain P1/7) [Complete proteome] [HAMAP] EMBL CAR45081.1
Taxonomic identifier218494 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length398 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding84 – 885GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding139 – 1424GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
C5W008 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: ED076CD11E42CAA2

FASTA39844,047
        10         20         30         40         50         60 
MAKEKYDRSK PHVNIGTIGH VDHGKTTLTA AITTVLARRL PSSVNQPKDY ASIDAAPEER 

        70         80         90        100        110        120 
ERGITINTAH VEYETEKRHY AHIDAPGHAD YVKNMITGAA QMDGAILVVA STDGPMPQTR 

       130        140        150        160        170        180 
EHILLSRQVG VKHLIVFMNK VDLVDDEELL ELVEMEIRDL LSEYDFPGDD LPVIQGSALK 

       190        200        210        220        230        240 
ALEGDSKYED IVMELMNTVD EYIPEPERDT DKPLLLPVED VFSITGRGTV ASGRIDRGTV 

       250        260        270        280        290        300 
RVNDEIEIVG LQEEKSKAVV TGVEMFRKQL DEGLAGDNVG VLLRGVQRDE IERGQVISKP 

       310        320        330        340        350        360 
GSINPHTKFK GEVYILTKEE GGRHTPFFDN YRPQFYFRTT DVTGSIKLPE GTEMVMPGDN 

       370        380        390 
VTIDVELIHP IAVEQGTTFS IREGGRTVGS GMVTEIEA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM946016 Genomic DNA. Translation: CAR45081.1.
RefSeqYP_003026408.1. NC_012925.1.

3D structure databases

ProteinModelPortalC5W008.
SMRC5W008. Positions 2-396.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING218494.SSU0482.

Proteomic databases

PRIDEC5W008.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAR45081; CAR45081; SSU0482.
GeneID8151376.
KEGGssi:SSU0482.
PATRIC19785916. VBIStrSui84581_0467.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
OMAVTPHTEF.
OrthoDBEOG6R5C6X.
ProtClustDBPRK12736.

Enzyme and pathway databases

BioCycSSUI218494:GJDS-538-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5W008_STRSE
AccessionPrimary (citable) accession number: C5W008
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: April 16, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)