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Protein

Superoxide dismutase

Gene

sodA

Organism
Streptococcus suis (strain P1/7)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciSSUI218494:GJDS-1406-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
Ordered Locus Names:SSU1356Imported
OrganismiStreptococcus suis (strain P1/7)Imported
Taxonomic identifieri218494 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000002055 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi218494.SSU1356.

Structurei

3D structure databases

ProteinModelPortaliC5VYN1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013583.
KOiK04564.
OMAiGTEWAEW.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5VYN1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIILPDLPY AYDALEPHID AETMTLHHDK HHATYVANAN AALEKHPEIG
60 70 80 90 100
EDLVALLSDV EQIPSDIRQA LINNGGGHLN HALFWELLSP EKTEISAELA
110 120 130 140 150
ADIDATFGSF DAFKEAFTAA ATTRFGSGWA FLVVNKEGKL EVISTANQDT
160 170 180 190 200
PIMQGLKPIL ALDVWEHAYY LNYRNVRPNY IKAFFEVINW DKVNELYKAA

K
Length:201
Mass (Da):22,479
Last modified:September 1, 2009 - v1
Checksum:i6179B7140EB3B626
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM946016 Genomic DNA. Translation: CAR46818.1.
RefSeqiYP_003027204.1. NC_012925.1.

Genome annotation databases

EnsemblBacteriaiCAR46818; CAR46818; SSU1356.
KEGGissi:SSU1356.
PATRICi19787614. VBIStrSui84581_1310.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM946016 Genomic DNA. Translation: CAR46818.1.
RefSeqiYP_003027204.1. NC_012925.1.

3D structure databases

ProteinModelPortaliC5VYN1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi218494.SSU1356.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAR46818; CAR46818; SSU1356.
KEGGissi:SSU1356.
PATRICi19787614. VBIStrSui84581_1310.

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013583.
KOiK04564.
OMAiGTEWAEW.
OrthoDBiEOG63NMNT.

Enzyme and pathway databases

BioCyciSSUI218494:GJDS-1406-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: P1/7Imported.

Entry informationi

Entry nameiC5VYN1_STRSE
AccessioniPrimary (citable) accession number: C5VYN1
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: April 29, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.