C5VVV3 (C5VVV3_STRSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Pseudouridine synthase RuleBase RU003886
EC=5.4.99.- RuleBase RU003886

Gene names

Ordered Locus Names:

SSU0732

Organism

Streptococcus suis (strain P1/7) [Complete proteome] [HAMAP] EMBL CAR45564.1

Taxonomic identifier

218494 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Streptococcus › Streptococcus suis

Protein attributes

Sequence length	297 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rluA family. RuleBase RU004243

Ontologies

Keywords
Molecular function	Isomerase RuleBase RU003886
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5VVV3 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 2A6BAB8B2ABAAFC9	FASTA	297	32,773
	10 20 30 40 50 60 MEVRVEVGGI RLDKALSDLT DLSRSVANEQ IKAGQVLVNG QPKKAKYSVQ VGDVLTYQIP 70 80 90 100 110 120 EVEEIDYVAE DIPLEIVFQD EDVAVVNKPQ GMVVHPSAGH TSGTLVNALL YHVKDLSGIN 130 140 150 160 170 180 GVLRPGIVHR IDKDTSGLLM IAKNDDAHTK LAAELKDKKS LRKYWAIVHG NLPNDRGVIE 190 200 210 220 230 240 APIGRSEKDR KKQAVTAKGK EAVTRFQVLE RFGDYTLVEL TLETGRTHQI RVHMAYIGHP 250 260 270 280 290 VAGDEAYGPR KTLKGHGQFL HARTLGFTHP RTGEVVEFTA EAPAIFQEAL EKLRKAE

References

[1]

"Rapid evolution of virulence and drug resistance in the emerging zoonotic pathogen Streptococcus suis." Holden M.T.G., Hauser H., Sanders M., Ngo T.H., Cherevach I., Cronin A., Goodhead I., Mungall K., Quail M.A., Price C., Rabbinowitsch E., Sharp S., Croucher N.J., Chieu T.B., Mai N.T.H., Diep T.S., Chinh N.T., Kehoe M. , Leigh J.A., Ward P.N., Dowson C.G., Whatmore A.M., Chanter N., Iversen P., Gottschalk M., Slater J.D., Smith H.E., Spratt B.G., Xu J., Ye C., Bentley S.D., Barrell B.G., Schultsz C., Maskell D.J., Parkhill J. PLoS ONE 4:e6072-e6072(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: P1/7.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM946016 Genomic DNA. Translation: CAR45564.1.
RefSeq	YP_003026617.1. NC_012925.1.
3D structure databases
ProteinModelPortal	C5VVV3.
ModBase	Search...
Protein-protein interaction databases
STRING	218494.SSU0732.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAR45564; CAR45564; SSU0732.
GeneID	8151739.
KEGG	ssi:SSU0732.
PATRIC	19786394. VBIStrSui84581_0703.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0564.
HOGENOM	HOG000275919.
KO	K06180.
OMA	KTIPAQT.
ProtClustDB	CLSK877106.
Enzyme and pathway databases
BioCyc	SSUI218494:GJDS-785-MONOMER.
Family and domain databases
Gene3D	3.10.290.10. 1 hit.
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR006225. PsdUridine_synth_RluC/D. IPR006224. PsdUridine_synth_RluC/D_CS. IPR006145. PsdUridine_synth_RsuA/RluD. IPR002942. S4_RNA-bd. [Graphical view]
Pfam	PF00849. PseudoU_synth_2. 1 hit. PF01479. S4. 1 hit. [Graphical view]
SMART	SM00363. S4. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
TIGRFAMs	TIGR00005. rluA_subfam. 1 hit.
PROSITE	PS01129. PSI_RLU. 1 hit. PS50889. S4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5VVV3_STRSE

Accession

Primary (citable) accession number: C5VVV3

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	May 29, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)