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C5PHY7 (C5PHY7_COCP7) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length969 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
C5PHY7 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: C5B76E247A0E5ACF

FASTA969106,658
        10         20         30         40         50         60 
MRLSRFCLTR SKTTLAPLIY GQPTSIRFSC SVSSYFVIQR RGYTLITTNM AQKSERKQTT 

        70         80         90        100        110        120 
LGKFFGGNAA SLPETKNQST LSFSSEAGSA KSETKPAKDL QDNEDDDVDM EDSSRDIPTK 

       130        140        150        160        170        180 
TGPVTPTKNG TVCSRPASPG APRVDSDEEI KSESARSESA SPSARKLKRQ KDSVVEESDG 

       190        200        210        220        230        240 
NESEPVTKRR RGPTKPKTES STSKPAAGRK NRKASPRGKT NDKGATSTPN KQLEINESAV 

       250        260        270        280        290        300 
GNAESSESDQ DDLLSESSSE ELDIKPEKEE KKKNTASKQR QKVQATLKSS ANDPYPDWKA 

       310        320        330        340        350        360 
GDPVPYAALC TTFSLVEMTT KRLAILAHCS LFLRQVLRLT PEDLLPTVQL MINKLAADYA 

       370        380        390        400        410        420 
GIELGIGESL IMKAIGESTG RSLAVIKADQ HEIGDLGLVA AKSRSNQPTM FKPKPLTVRG 

       430        440        450        460        470        480 
VHESLLAIAK MQGHGSQEKK VGGIKKLLSS ADSATAGKGS KGIDITKNKG GPSEAKYIVR 

       490        500        510        520        530        540 
FLEGKLRLGL ADKTVLVALA HAMVAHETLS KGNKTPSAEQ LAKGEAILKQ VYSELPSYEV 

       550        560        570        580        590        600 
IIPAMLEHGI FNLQENCKLQ PGVPLKPMLA KPTKSISEVL DRFEGKDFTC EYKYDGERAQ 

       610        620        630        640        650        660 
IHYVSQDAIK DYTATAGTLQ KDGKGLCAIF SRNSEDLSKK YPDVLDKLES WVRPGTKSFV 

       670        680        690        700        710        720 
LDCETVAWDL ENKKVLPFQQ LMTRKRKDVK AEDIKVRVCI FAFDILFLNG APTVKMTFRE 

       730        740        750        760        770        780 
RRALLHETFV PTEGEFAFAQ YGNTSNVEEI QTLLDESVKS SCEGLMVKML DTEESGYEPS 

       790        800        810        820        830        840 
KRSRNWLKVK KDYLAGIGDS LDLVVIGAYF GKGKRTSVYG AFLLAAYNPS TENYETICNI 

       850        860        870        880        890        900 
GTGFSDALLD ELHKSLSPLA ISQPKPFYSH SSVPKDQPDV WFEPRLVWEV KAADLTISPR 

       910        920        930        940        950        960 
YRCASDEVMG MAGADGKGVS LRFPRYIKAR DDKKPDQAST TRMVAEMYRK QESVTKEDKG 


KGVDDDWEY 

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References

[1]"Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives."
Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R., Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y., McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M., Barker B.M., Galgiani J.N. expand/collapse author list , Orbach M.J., Kirkland T.N., Cole G.T., Henn M.R., Birren B.W., Taylor J.W.
Genome Res. 19:1722-1731(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C735.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
ACFW01000049 Genomic DNA. Translation: EER24140.1.
RefSeqXP_003066285.1. XM_003066239.1.
UniGeneCpo.3953.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING222929.C5PHY7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID9691755.
KEGGcpw:CPC735_055100.

Phylogenomic databases

eggNOGCOG1793.
KOK10747.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 2 hits.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5PHY7_COCP7
AccessionPrimary (citable) accession number: C5PHY7
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: November 13, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)