C5M948 (C5M948_CANTT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribosomal protein RuleBase RU000659

Gene names

ORF Names:

CTRG_02920 EMBL EER34102.1

Organism

Candida tropicalis (strain ATCC MYA-3404 / T1) (Yeast) [Complete proteome]

Taxonomic identifier

294747 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Saccharomycotina › Saccharomycetes › Saccharomycetales › mitosporic Saccharomycetales › Candida › Candida tropicalis

Protein attributes

Sequence length	217 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L1P family. RuleBase RU000659

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU000659 EMBL EER34102.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5M948 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: F75692E94AF522B2	FASTA	217	24,370
	10 20 30 40 50 60 MSKITSSGVR ENVKKLLEYS TETKKRNFLE TVELQVGLKN YDPQRDKRFS GTLKLPQVPR 70 80 90 100 110 120 PNMTICIFGD AFDVDRAKSL GVDAMSVDDL KKLNKNKKLI KKLAKKYNAF VASEVLIKQI 130 140 150 160 170 180 PRLLGPTLSK AGKFPTPVSH NDDLYSKVTD VKSTIKFQLK KVLCLAVAVG NVDMEEDILV 190 200 210 NQIMMAANFL VSLLKKNWQN VGSLVIKSTM GPSFRIY

References

[1]

"Evolution of pathogenicity and sexual reproduction in eight Candida genomes." Butler G., Rasmussen M.D., Lin M.F., Santos M.A.S., Sakthikumar S., Munro C.A., Rheinbay E., Grabherr M., Forche A., Reedy J.L., Agrafioti I., Arnaud M.B., Bates S., Brown A.J.P., Brunke S., Costanzo M.C., Fitzpatrick D.A., de Groot P.W.J. , Harris D., Hoyer L.L., Hube B., Klis F.M., Kodira C., Lennard N., Logue M.E., Martin R., Neiman A.M., Nikolaou E., Quail M.A., Quinn J., Santos M.C., Schmitzberger F.F., Sherlock G., Shah P., Silverstein K.A.T., Skrzypek M.S., Soll D., Staggs R., Stansfield I., Stumpf M.P.H., Sudbery P.E., Srikantha T., Zeng Q., Berman J., Berriman M., Heitman J., Gow N.A.R., Lorenz M.C., Birren B.W., Kellis M., Cuomo C.A. Nature 459:657-662(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC MYA-3404 / T1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG692397 Genomic DNA. Translation: EER34102.1.
RefSeq	XP_002548623.1. XM_002548577.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8299369.
KEGG	ctp:CTRG_02920.
Phylogenomic databases
KO	K02865.
OrthoDB	EOG40ZV6T.
Family and domain databases
Gene3D	3.30.190.20. 2 hits. 3.40.50.790. 1 hit.
InterPro	IPR002143. Ribosomal_L1. IPR016094. Ribosomal_L1_2-a/b-sand. IPR016095. Ribosomal_L1_3-a/b-sand. IPR023673. Ribosomal_L1_CS. IPR023674. Ribosomal_L1_SF. [Graphical view]
Pfam	PF00687. Ribosomal_L1. 1 hit. [Graphical view]
PIRSF	PIRSF002155. Ribosomal_L1. 1 hit.
SUPFAM	SSF56808. Ribosomal_L1. 1 hit.
PROSITE	PS01199. RIBOSOMAL_L1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5M948_CANTT

Accession

Primary (citable) accession number: C5M948

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	March 6, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)