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C5M948

- C5M948_CANTT

UniProt

C5M948 - C5M948_CANTT

Protein

Ribosomal protein

Gene

CTRG_02920

Organism
Candida tropicalis (strain ATCC MYA-3404 / T1) (Yeast)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (28 Jul 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. RNA binding Source: InterPro
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribosomal proteinUniRule annotation
    Gene namesi
    ORF Names:CTRG_02920Imported
    OrganismiCandida tropicalis (strain ATCC MYA-3404 / T1) (Yeast)Imported
    Taxonomic identifieri294747 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesmitosporic SaccharomycetalesCandida
    ProteomesiUP000002037: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. large ribosomal subunit Source: InterPro

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L1P family.UniRule annotation

    Phylogenomic databases

    KOiK02865.
    OrthoDBiEOG73Z358.

    Family and domain databases

    Gene3Di3.30.190.20. 2 hits.
    3.40.50.790. 1 hit.
    InterProiIPR002143. Ribosomal_L1.
    IPR023674. Ribosomal_L1-like.
    IPR028364. Ribosomal_L1/biogenesis.
    IPR016094. Ribosomal_L1_2-a/b-sand.
    IPR016095. Ribosomal_L1_3-a/b-sand.
    IPR023673. Ribosomal_L1_CS.
    [Graphical view]
    PfamiPF00687. Ribosomal_L1. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002155. Ribosomal_L1. 1 hit.
    SUPFAMiSSF56808. SSF56808. 1 hit.
    PROSITEiPS01199. RIBOSOMAL_L1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5M948-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSKITSSGVR ENVKKLLEYS TETKKRNFLE TVELQVGLKN YDPQRDKRFS    50
    GTLKLPQVPR PNMTICIFGD AFDVDRAKSL GVDAMSVDDL KKLNKNKKLI 100
    KKLAKKYNAF VASEVLIKQI PRLLGPTLSK AGKFPTPVSH NDDLYSKVTD 150
    VKSTIKFQLK KVLCLAVAVG NVDMEEDILV NQIMMAANFL VSLLKKNWQN 200
    VGSLVIKSTM GPSFRIY 217
    Length:217
    Mass (Da):24,370
    Last modified:July 28, 2009 - v1
    Checksum:iF75692E94AF522B2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GG692397 Genomic DNA. Translation: EER34102.1.
    RefSeqiXP_002548623.1. XM_002548577.1.

    Genome annotation databases

    GeneIDi8299369.
    KEGGictp:CTRG_02920.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GG692397 Genomic DNA. Translation: EER34102.1 .
    RefSeqi XP_002548623.1. XM_002548577.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 8299369.
    KEGGi ctp:CTRG_02920.

    Phylogenomic databases

    KOi K02865.
    OrthoDBi EOG73Z358.

    Family and domain databases

    Gene3Di 3.30.190.20. 2 hits.
    3.40.50.790. 1 hit.
    InterProi IPR002143. Ribosomal_L1.
    IPR023674. Ribosomal_L1-like.
    IPR028364. Ribosomal_L1/biogenesis.
    IPR016094. Ribosomal_L1_2-a/b-sand.
    IPR016095. Ribosomal_L1_3-a/b-sand.
    IPR023673. Ribosomal_L1_CS.
    [Graphical view ]
    Pfami PF00687. Ribosomal_L1. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002155. Ribosomal_L1. 1 hit.
    SUPFAMi SSF56808. SSF56808. 1 hit.
    PROSITEi PS01199. RIBOSOMAL_L1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC MYA-3404 / T1Imported.

    Entry informationi

    Entry nameiC5M948_CANTT
    AccessioniPrimary (citable) accession number: C5M948
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3