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C5M643 (C5M643_CANTT) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length937 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
C5M643 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 8509B297C37DA67C

FASTA937109,571
        10         20         30         40         50         60 
MAYYPYDGEM KYFLDDIKPP PPNNIEPTFT LLTNELFDKL DAVRRENLNE FRTITEKKSF 

        70         80         90        100        110        120 
IIKKFIDVFR THIGQDIYPS VKLIFPEKVG RLYFIKEIAL ARLLIRMYKI PKDSDDYKLL 

       130        140        150        160        170        180 
HNWNQQYQRS KRFVVDEKKI RDLPLQASRI IGKRRPYVEK PKEFTVQQIN SILDQLTMAK 

       190        200        210        220        230        240 
MSQDQMEILK PVLDELGISE VRWLIHIVLK KTILSNMERV FFNDWHPDGY RVFTICNDLQ 

       250        260        270        280        290        300 
KAFQFSTNPE ERLDSSQLNI HPLFKFKPQL AEKLTSSYNN LVKKLQNKHE MDPPYEAKFK 

       310        320        330        340        350        360 
EMDLQDKFYI EEKMDGDRML LHKDGDSFKF FSRKLKDYSF LYGESFQLGS LTKYLRHAFA 

       370        380        390        400        410        420 
GNVKSVILDG EMVAYDYERN AILPFGTLKS SAIQESVRQF TTIDQYQQQT SYPYYLVFDI 

       430        440        450        460        470        480 
LYLNGKDLTN YPLFFRKNIL NRIIRPVPHR FEVHDARLGS SPQDIERAIR EVVSSRSEGL 

       490        500        510        520        530        540 
VLKNVQSKYA IDGFRNPDWI KVKPEYLEKF GENLDLVVIG KIPAIKNSYM CGLKSSVDGV 

       550        560        570        580        590        600 
YYSFCVCANG IEIDEFDKIE RITHGKWIKT DDEMPPESLI KFGTKLPTYW IHPKDSLVLE 

       610        620        630        640        650        660 
IRARSIDARK EKTYAVGTTL HCNHCRKIRD DKPIDECITL ENYLEMKANY SNDLSHAQNA 

       670        680        690        700        710        720 
LGKKRGLSDS FNEGPSLKKT KVEFDLFEGF EFLIMSDKKE ANGDSTSIDE LKIMVKKYGG 

       730        740        750        760        770        780 
KVVNSIDVRT NMQIIVITEK DLPVCNKYLL RGLDLIKPCW IMECIARRKI LQLEPYFIYA 

       790        800        810        820        830        840 
TGNWEKFQHM ADRYGDSYII HQPLNIVVPN LSNEELKRLR NSYDWGDSKP LVYLFEDLSF 

       850        860        870        880        890        900 
HILGNSVAAE SLKDRIERFN GEVIDNYIKC YYIVIPQSTP RENALKEIDI MAKQIAEALT 

       910        920        930 
IDESGKTSRI PYFVTESFVT KSIELNCVVD PEDYKYV 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GG692396 Genomic DNA. Translation: EER34463.1.
RefSeqXP_002547018.1. XM_002546972.1.

3D structure databases

ProteinModelPortalC5M643.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8301051.
KEGGctp:CTRG_01324.

Phylogenomic databases

KOK10777.
OrthoDBEOG7QC84G.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
3.40.50.10190. 1 hit.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF00533. BRCT. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5M643_CANTT
AccessionPrimary (citable) accession number: C5M643
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: November 13, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)