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C5M643

- C5M643_CANTT

UniProt

C5M643 - C5M643_CANTT

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Protein
DNA ligase
Gene
CTRG_01324
Organism
Candida tropicalis (strain ATCC MYA-3404 / T1) (Yeast)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotationImported

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:CTRG_01324Imported
OrganismiCandida tropicalis (strain ATCC MYA-3404 / T1) (Yeast)
Taxonomic identifieri294747 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesmitosporic SaccharomycetalesCandida
ProteomesiUP000002037: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliC5M643.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK10777.
OrthoDBiEOG7QC84G.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.10190. 1 hit.
InterProiIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00533. BRCT. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5M643-1 [UniParc]FASTAAdd to Basket

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MAYYPYDGEM KYFLDDIKPP PPNNIEPTFT LLTNELFDKL DAVRRENLNE    50
FRTITEKKSF IIKKFIDVFR THIGQDIYPS VKLIFPEKVG RLYFIKEIAL 100
ARLLIRMYKI PKDSDDYKLL HNWNQQYQRS KRFVVDEKKI RDLPLQASRI 150
IGKRRPYVEK PKEFTVQQIN SILDQLTMAK MSQDQMEILK PVLDELGISE 200
VRWLIHIVLK KTILSNMERV FFNDWHPDGY RVFTICNDLQ KAFQFSTNPE 250
ERLDSSQLNI HPLFKFKPQL AEKLTSSYNN LVKKLQNKHE MDPPYEAKFK 300
EMDLQDKFYI EEKMDGDRML LHKDGDSFKF FSRKLKDYSF LYGESFQLGS 350
LTKYLRHAFA GNVKSVILDG EMVAYDYERN AILPFGTLKS SAIQESVRQF 400
TTIDQYQQQT SYPYYLVFDI LYLNGKDLTN YPLFFRKNIL NRIIRPVPHR 450
FEVHDARLGS SPQDIERAIR EVVSSRSEGL VLKNVQSKYA IDGFRNPDWI 500
KVKPEYLEKF GENLDLVVIG KIPAIKNSYM CGLKSSVDGV YYSFCVCANG 550
IEIDEFDKIE RITHGKWIKT DDEMPPESLI KFGTKLPTYW IHPKDSLVLE 600
IRARSIDARK EKTYAVGTTL HCNHCRKIRD DKPIDECITL ENYLEMKANY 650
SNDLSHAQNA LGKKRGLSDS FNEGPSLKKT KVEFDLFEGF EFLIMSDKKE 700
ANGDSTSIDE LKIMVKKYGG KVVNSIDVRT NMQIIVITEK DLPVCNKYLL 750
RGLDLIKPCW IMECIARRKI LQLEPYFIYA TGNWEKFQHM ADRYGDSYII 800
HQPLNIVVPN LSNEELKRLR NSYDWGDSKP LVYLFEDLSF HILGNSVAAE 850
SLKDRIERFN GEVIDNYIKC YYIVIPQSTP RENALKEIDI MAKQIAEALT 900
IDESGKTSRI PYFVTESFVT KSIELNCVVD PEDYKYV 937
Length:937
Mass (Da):109,571
Last modified:July 28, 2009 - v1
Checksum:i8509B297C37DA67C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GG692396 Genomic DNA. Translation: EER34463.1.
RefSeqiXP_002547018.1. XM_002546972.1.

Genome annotation databases

GeneIDi8301051.
KEGGictp:CTRG_01324.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GG692396 Genomic DNA. Translation: EER34463.1 .
RefSeqi XP_002547018.1. XM_002546972.1.

3D structure databases

ProteinModelPortali C5M643.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 8301051.
KEGGi ctp:CTRG_01324.

Phylogenomic databases

KOi K10777.
OrthoDBi EOG7QC84G.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
3.40.50.10190. 1 hit.
InterProi IPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF00533. BRCT. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SMARTi SM00292. BRCT. 2 hits.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC MYA-3404 / T1.

Entry informationi

Entry nameiC5M643_CANTT
AccessioniPrimary (citable) accession number: C5M643
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: November 13, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi