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C5M643

- C5M643_CANTT

UniProt

C5M643 - C5M643_CANTT

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Protein

DNA ligase

Gene

CTRG_01324

Organism
Candida tropicalis (strain ATCC MYA-3404 / T1) (Yeast)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotationImported

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:CTRG_01324Imported
OrganismiCandida tropicalis (strain ATCC MYA-3404 / T1) (Yeast)Imported
Taxonomic identifieri294747 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDebaryomycetaceaeCandida/Lodderomyces cladeCandida
ProteomesiUP000002037: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliC5M643.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

KOiK10777.
OrthoDBiEOG7QC84G.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.10190. 1 hit.
InterProiIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PANTHERiPTHR10459:SF7. PTHR10459:SF7. 1 hit.
PfamiPF00533. BRCT. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5M643-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAYYPYDGEM KYFLDDIKPP PPNNIEPTFT LLTNELFDKL DAVRRENLNE
60 70 80 90 100
FRTITEKKSF IIKKFIDVFR THIGQDIYPS VKLIFPEKVG RLYFIKEIAL
110 120 130 140 150
ARLLIRMYKI PKDSDDYKLL HNWNQQYQRS KRFVVDEKKI RDLPLQASRI
160 170 180 190 200
IGKRRPYVEK PKEFTVQQIN SILDQLTMAK MSQDQMEILK PVLDELGISE
210 220 230 240 250
VRWLIHIVLK KTILSNMERV FFNDWHPDGY RVFTICNDLQ KAFQFSTNPE
260 270 280 290 300
ERLDSSQLNI HPLFKFKPQL AEKLTSSYNN LVKKLQNKHE MDPPYEAKFK
310 320 330 340 350
EMDLQDKFYI EEKMDGDRML LHKDGDSFKF FSRKLKDYSF LYGESFQLGS
360 370 380 390 400
LTKYLRHAFA GNVKSVILDG EMVAYDYERN AILPFGTLKS SAIQESVRQF
410 420 430 440 450
TTIDQYQQQT SYPYYLVFDI LYLNGKDLTN YPLFFRKNIL NRIIRPVPHR
460 470 480 490 500
FEVHDARLGS SPQDIERAIR EVVSSRSEGL VLKNVQSKYA IDGFRNPDWI
510 520 530 540 550
KVKPEYLEKF GENLDLVVIG KIPAIKNSYM CGLKSSVDGV YYSFCVCANG
560 570 580 590 600
IEIDEFDKIE RITHGKWIKT DDEMPPESLI KFGTKLPTYW IHPKDSLVLE
610 620 630 640 650
IRARSIDARK EKTYAVGTTL HCNHCRKIRD DKPIDECITL ENYLEMKANY
660 670 680 690 700
SNDLSHAQNA LGKKRGLSDS FNEGPSLKKT KVEFDLFEGF EFLIMSDKKE
710 720 730 740 750
ANGDSTSIDE LKIMVKKYGG KVVNSIDVRT NMQIIVITEK DLPVCNKYLL
760 770 780 790 800
RGLDLIKPCW IMECIARRKI LQLEPYFIYA TGNWEKFQHM ADRYGDSYII
810 820 830 840 850
HQPLNIVVPN LSNEELKRLR NSYDWGDSKP LVYLFEDLSF HILGNSVAAE
860 870 880 890 900
SLKDRIERFN GEVIDNYIKC YYIVIPQSTP RENALKEIDI MAKQIAEALT
910 920 930
IDESGKTSRI PYFVTESFVT KSIELNCVVD PEDYKYV
Length:937
Mass (Da):109,571
Last modified:July 28, 2009 - v1
Checksum:i8509B297C37DA67C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG692396 Genomic DNA. Translation: EER34463.1.
RefSeqiXP_002547018.1. XM_002546972.1.

Genome annotation databases

GeneIDi8301051.
KEGGictp:CTRG_01324.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG692396 Genomic DNA. Translation: EER34463.1 .
RefSeqi XP_002547018.1. XM_002546972.1.

3D structure databases

ProteinModelPortali C5M643.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 8301051.
KEGGi ctp:CTRG_01324.

Phylogenomic databases

KOi K10777.
OrthoDBi EOG7QC84G.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
3.40.50.10190. 1 hit.
InterProi IPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
PANTHERi PTHR10459:SF7. PTHR10459:SF7. 1 hit.
Pfami PF00533. BRCT. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SMARTi SM00292. BRCT. 2 hits.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC MYA-3404 / T1Imported.

Entry informationi

Entry nameiC5M643_CANTT
AccessioniPrimary (citable) accession number: C5M643
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: October 29, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3