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C5M643

- C5M643_CANTT

UniProt

C5M643 - C5M643_CANTT

Protein

DNA ligase

Gene

CTRG_01324

Organism
Candida tropicalis (strain ATCC MYA-3404 / T1) (Yeast)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (28 Jul 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotationImported

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:CTRG_01324Imported
    OrganismiCandida tropicalis (strain ATCC MYA-3404 / T1) (Yeast)Imported
    Taxonomic identifieri294747 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesmitosporic SaccharomycetalesCandida
    ProteomesiUP000002037: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliC5M643.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    KOiK10777.
    OrthoDBiEOG7QC84G.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    3.40.50.10190. 1 hit.
    InterProiIPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF00533. BRCT. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SMARTiSM00292. BRCT. 2 hits.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5M643-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAYYPYDGEM KYFLDDIKPP PPNNIEPTFT LLTNELFDKL DAVRRENLNE    50
    FRTITEKKSF IIKKFIDVFR THIGQDIYPS VKLIFPEKVG RLYFIKEIAL 100
    ARLLIRMYKI PKDSDDYKLL HNWNQQYQRS KRFVVDEKKI RDLPLQASRI 150
    IGKRRPYVEK PKEFTVQQIN SILDQLTMAK MSQDQMEILK PVLDELGISE 200
    VRWLIHIVLK KTILSNMERV FFNDWHPDGY RVFTICNDLQ KAFQFSTNPE 250
    ERLDSSQLNI HPLFKFKPQL AEKLTSSYNN LVKKLQNKHE MDPPYEAKFK 300
    EMDLQDKFYI EEKMDGDRML LHKDGDSFKF FSRKLKDYSF LYGESFQLGS 350
    LTKYLRHAFA GNVKSVILDG EMVAYDYERN AILPFGTLKS SAIQESVRQF 400
    TTIDQYQQQT SYPYYLVFDI LYLNGKDLTN YPLFFRKNIL NRIIRPVPHR 450
    FEVHDARLGS SPQDIERAIR EVVSSRSEGL VLKNVQSKYA IDGFRNPDWI 500
    KVKPEYLEKF GENLDLVVIG KIPAIKNSYM CGLKSSVDGV YYSFCVCANG 550
    IEIDEFDKIE RITHGKWIKT DDEMPPESLI KFGTKLPTYW IHPKDSLVLE 600
    IRARSIDARK EKTYAVGTTL HCNHCRKIRD DKPIDECITL ENYLEMKANY 650
    SNDLSHAQNA LGKKRGLSDS FNEGPSLKKT KVEFDLFEGF EFLIMSDKKE 700
    ANGDSTSIDE LKIMVKKYGG KVVNSIDVRT NMQIIVITEK DLPVCNKYLL 750
    RGLDLIKPCW IMECIARRKI LQLEPYFIYA TGNWEKFQHM ADRYGDSYII 800
    HQPLNIVVPN LSNEELKRLR NSYDWGDSKP LVYLFEDLSF HILGNSVAAE 850
    SLKDRIERFN GEVIDNYIKC YYIVIPQSTP RENALKEIDI MAKQIAEALT 900
    IDESGKTSRI PYFVTESFVT KSIELNCVVD PEDYKYV 937
    Length:937
    Mass (Da):109,571
    Last modified:July 28, 2009 - v1
    Checksum:i8509B297C37DA67C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GG692396 Genomic DNA. Translation: EER34463.1.
    RefSeqiXP_002547018.1. XM_002546972.1.

    Genome annotation databases

    GeneIDi8301051.
    KEGGictp:CTRG_01324.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GG692396 Genomic DNA. Translation: EER34463.1 .
    RefSeqi XP_002547018.1. XM_002546972.1.

    3D structure databases

    ProteinModelPortali C5M643.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 8301051.
    KEGGi ctp:CTRG_01324.

    Phylogenomic databases

    KOi K10777.
    OrthoDBi EOG7QC84G.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    3.40.50.10190. 1 hit.
    InterProi IPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF00533. BRCT. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SMARTi SM00292. BRCT. 2 hits.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC MYA-3404 / T1Imported.

    Entry informationi

    Entry nameiC5M643_CANTT
    AccessioniPrimary (citable) accession number: C5M643
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3