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Protein
Submitted name:

Tropomyosin 1, isoforms 33/34, putative

Gene

Pmar_PMAR006812

Organism
Perkinsus marinus (strain ATCC 50983 / TXsc)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Tropomyosin 1, isoforms 33/34, putativeImported
Gene namesi
ORF Names:Pmar_PMAR006812Imported
OrganismiPerkinsus marinus (strain ATCC 50983 / TXsc)Imported
Taxonomic identifieri423536 [NCBI]
Taxonomic lineageiEukaryotaAlveolataPerkinseaPerkinsidaPerkinsidaePerkinsus
Proteomesi
  • UP000007800 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi423536.XP_002788123.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 233Not3InterPro annotationAdd BLAST230
Domaini410 – 536NOT2_3_5InterPro annotationAdd BLAST127

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili32 – 52Sequence analysisAdd BLAST21
Coiled coili77 – 97Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2150 Eukaryota
COG5665 LUCA
InParanoidiC5K6J9
OMAiENGEYCC

Family and domain databases

Gene3Di2.30.30.1020, 1 hit
InterProiView protein in InterPro
IPR038635 CCR4-NOT_su2/3/5_N_sf
IPR012270 CCR4-NOT_su3/5
IPR007282 NOT
IPR007207 Not_N
PfamiView protein in Pfam
PF04153 NOT2_3_5, 1 hit
PF04065 Not3, 1 hit
PIRSFiPIRSF005290 NOT_su_3_5, 2 hits

Sequencei

Sequence statusi: Complete.

C5K6J9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSASRKLQAT IDVTLKKVDE GIDEFQQVWR KVEESQNQNQ REKNQMDLKK
60 70 80 90 100
EIKKLQRFRE DIMKWINGTE VKDKGKLTDA RRKIEVEMER FKEFERESKT
110 120 130 140 150
KPFSFIGLQA QDKVDPAEQK RMETRSQLES YVDQLKQQVG LSSAESTRVA
160 170 180 190 200
ELSSSGRVEG RSMELVLLVE LWIARHQWHQ AKLEQLIRKL DNEEDVDYDE
210 220 230 240 250
LEITEQALDY YLEEHENPDY YHDEELYTNH NLDDNRINAY TKPIDVDGTD
260 270 280 290 300
NGDGEPTDTQ ESQESSDEDK QPKKPVKEVP LSAGAKAMQK ALAAKAAGYQ
310 320 330 340 350
PPCKTPPRPT LPALPSISPP APPSPPAVPQ YPPPPLLDDA SQIDKKEATV
360 370 380 390 400
SSPAPSPPLA SMPPPGLKAP VVEDEPIKVE ERHDDTTPLS TTATTTTPVE
410 420 430 440 450
PGLAVLLRSY ENRPMPDDLC CSEGNYIPAN PIPSSAARKS PYPQQPVNDT
460 470 480 490 500
ESMFQKLSFD TLMFVFYYRP GSYAQYLAAR ELKRMSWRFH SRYGTWFKRH
510 520 530
SEPSVVNPKF EYGTYVYFDC YADEWAQKIK KDFQFE
Length:536
Mass (Da):61,331
Last modified:July 28, 2009 - v1
Checksum:i7E3FB370EA5B5020
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG670888 Genomic DNA Translation: EER19919.1
RefSeqiXP_002788123.1, XM_002788077.1

Genome annotation databases

EnsemblProtistsiEER19919; EER19919; Pmar_PMAR006812
GeneIDi9058583

Similar proteinsi

Entry informationi

Entry nameiC5K6J9_PERM5
AccessioniPrimary (citable) accession number: C5K6J9
Entry historyiIntegrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: April 25, 2018
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health