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Protein
Submitted name:

Tropomyosin 1, isoforms 33/34, putative

Gene

Pmar_PMAR006812

Organism
Perkinsus marinus (strain ATCC 50983 / TXsc)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Tropomyosin 1, isoforms 33/34, putativeImported
Gene namesi
ORF Names:Pmar_PMAR006812Imported
OrganismiPerkinsus marinus (strain ATCC 50983 / TXsc)Imported
Taxonomic identifieri423536 [NCBI]
Taxonomic lineageiEukaryotaAlveolataPerkinseaPerkinsidaPerkinsidaePerkinsus
ProteomesiUP000007800 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi423536.XP_002788123.1.

Family & Domainsi

Phylogenomic databases

InParanoidiC5K6J9.

Family and domain databases

InterProiIPR007282. NOT.
IPR007207. Not_N.
[Graphical view]
PfamiPF04153. NOT2_3_5. 1 hit.
PF04065. Not3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5K6J9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSASRKLQAT IDVTLKKVDE GIDEFQQVWR KVEESQNQNQ REKNQMDLKK
60 70 80 90 100
EIKKLQRFRE DIMKWINGTE VKDKGKLTDA RRKIEVEMER FKEFERESKT
110 120 130 140 150
KPFSFIGLQA QDKVDPAEQK RMETRSQLES YVDQLKQQVG LSSAESTRVA
160 170 180 190 200
ELSSSGRVEG RSMELVLLVE LWIARHQWHQ AKLEQLIRKL DNEEDVDYDE
210 220 230 240 250
LEITEQALDY YLEEHENPDY YHDEELYTNH NLDDNRINAY TKPIDVDGTD
260 270 280 290 300
NGDGEPTDTQ ESQESSDEDK QPKKPVKEVP LSAGAKAMQK ALAAKAAGYQ
310 320 330 340 350
PPCKTPPRPT LPALPSISPP APPSPPAVPQ YPPPPLLDDA SQIDKKEATV
360 370 380 390 400
SSPAPSPPLA SMPPPGLKAP VVEDEPIKVE ERHDDTTPLS TTATTTTPVE
410 420 430 440 450
PGLAVLLRSY ENRPMPDDLC CSEGNYIPAN PIPSSAARKS PYPQQPVNDT
460 470 480 490 500
ESMFQKLSFD TLMFVFYYRP GSYAQYLAAR ELKRMSWRFH SRYGTWFKRH
510 520 530
SEPSVVNPKF EYGTYVYFDC YADEWAQKIK KDFQFE
Length:536
Mass (Da):61,331
Last modified:July 28, 2009 - v1
Checksum:i7E3FB370EA5B5020
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG670888 Genomic DNA. Translation: EER19919.1.
RefSeqiXP_002788123.1. XM_002788077.1.

Genome annotation databases

GeneIDi9058583.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG670888 Genomic DNA. Translation: EER19919.1.
RefSeqiXP_002788123.1. XM_002788077.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi423536.XP_002788123.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi9058583.

Phylogenomic databases

InParanoidiC5K6J9.

Family and domain databases

InterProiIPR007282. NOT.
IPR007207. Not_N.
[Graphical view]
PfamiPF04153. NOT2_3_5. 1 hit.
PF04065. Not3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. El-Sayed N., Caler E., Inman J., Amedeo P., Hass B., Wortman J.
    Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 50983 / TXscImported.

Entry informationi

Entry nameiC5K6J9_PERM5
AccessioniPrimary (citable) accession number: C5K6J9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: June 24, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.