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C5K6J9

- C5K6J9_PERM5

UniProt

C5K6J9 - C5K6J9_PERM5

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Protein
Submitted name:

Tropomyosin 1, isoforms 33/34, putative

Gene

Pmar_PMAR006812

Organism
Perkinsus marinus (strain ATCC 50983 / TXsc)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Tropomyosin 1, isoforms 33/34, putativeImported
Gene namesi
ORF Names:Pmar_PMAR006812Imported
OrganismiPerkinsus marinus (strain ATCC 50983 / TXsc)Imported
Taxonomic identifieri423536 [NCBI]
Taxonomic lineageiEukaryotaAlveolataPerkinseaPerkinsidaPerkinsidaePerkinsus
ProteomesiUP000007800: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

InParanoidiC5K6J9.

Family and domain databases

InterProiIPR007282. NOT.
IPR007207. Not_N.
[Graphical view]
PfamiPF04153. NOT2_3_5. 1 hit.
PF04065. Not3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5K6J9-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSASRKLQAT IDVTLKKVDE GIDEFQQVWR KVEESQNQNQ REKNQMDLKK
60 70 80 90 100
EIKKLQRFRE DIMKWINGTE VKDKGKLTDA RRKIEVEMER FKEFERESKT
110 120 130 140 150
KPFSFIGLQA QDKVDPAEQK RMETRSQLES YVDQLKQQVG LSSAESTRVA
160 170 180 190 200
ELSSSGRVEG RSMELVLLVE LWIARHQWHQ AKLEQLIRKL DNEEDVDYDE
210 220 230 240 250
LEITEQALDY YLEEHENPDY YHDEELYTNH NLDDNRINAY TKPIDVDGTD
260 270 280 290 300
NGDGEPTDTQ ESQESSDEDK QPKKPVKEVP LSAGAKAMQK ALAAKAAGYQ
310 320 330 340 350
PPCKTPPRPT LPALPSISPP APPSPPAVPQ YPPPPLLDDA SQIDKKEATV
360 370 380 390 400
SSPAPSPPLA SMPPPGLKAP VVEDEPIKVE ERHDDTTPLS TTATTTTPVE
410 420 430 440 450
PGLAVLLRSY ENRPMPDDLC CSEGNYIPAN PIPSSAARKS PYPQQPVNDT
460 470 480 490 500
ESMFQKLSFD TLMFVFYYRP GSYAQYLAAR ELKRMSWRFH SRYGTWFKRH
510 520 530
SEPSVVNPKF EYGTYVYFDC YADEWAQKIK KDFQFE
Length:536
Mass (Da):61,331
Last modified:July 28, 2009 - v1
Checksum:i7E3FB370EA5B5020
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG670888 Genomic DNA. Translation: EER19919.1.
RefSeqiXP_002788123.1. XM_002788077.1.

Genome annotation databases

GeneIDi9058583.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG670888 Genomic DNA. Translation: EER19919.1 .
RefSeqi XP_002788123.1. XM_002788077.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 9058583.

Phylogenomic databases

InParanoidi C5K6J9.

Family and domain databases

InterProi IPR007282. NOT.
IPR007207. Not_N.
[Graphical view ]
Pfami PF04153. NOT2_3_5. 1 hit.
PF04065. Not3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. El-Sayed N., Caler E., Inman J., Amedeo P., Hass B., Wortman J.
    Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 50983 / TXscImported.

Entry informationi

Entry nameiC5K6J9_PERM5
AccessioniPrimary (citable) accession number: C5K6J9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: October 29, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3