Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

C5E216 (C5E216_LACTC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length723 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
C5E216 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: EF9EDC317480A65A

FASTA72380,073
        10         20         30         40         50         60 
MLRLVRAEMS SIKKQATLAK FFSSKKRSVE EEKSHEPAKK LHSDPIGAGS GSPSSSPPLA 

        70         80         90        100        110        120 
TGSSDAGSVK VETSATSTGE NTKAGTPTLP DSDEPAKRAV AATKGDPAKL GASAPKDSKI 

       130        140        150        160        170        180 
LYAEMCNVFN EIEGTSSRLQ IVKLCGDFLY SVLLKARKDI VPITYLLINK LGPDYQPGLE 

       190        200        210        220        230        240 
LGLGEGLLMK TISESCGKSL QQIKARYREL GDLGRIAQEA RAVQPTMFKP KPLTTGEVFS 

       250        260        270        280        290        300 
NLQAIARSQG KDSQLRKVQL IKRMLTACQG LEAKFLIRSL ESKLRIGLAE KSVLVALSKA 

       310        320        330        340        350        360 
LLTYEHNGKE PSSELVDTAE QKIRDAFCQV PNYQIVIETA LEHGIMELDK HCVLTPGIPL 

       370        380        390        400        410        420 
KPMLAKPSKS ISEVLDRFQG QRFTCEYKYD GERAQVHLLP DGSMRIYSRN GENMTERYPE 

       430        440        450        460        470        480 
IRISDFIADP ARTHTLILDC EAVAWDKEKN TILPFQVLST RKRKGVAVED VKVRVCLFAF 

       490        500        510        520        530        540 
DILCYNDEPL ITRPLAERRA CLERALVPVP GELQLASEVT TMSLDELQHY LDQAVRDCCE 

       550        560        570        580        590        600 
GLMVKILEGE ESHYEPSKRS RNWLKLKKDY LQGVGDSLDL CVLGAYYGRG KRTGTYGGFL 

       610        620        630        640        650        660 
LGCYNQDSGE YETCCKIGTG FSEEMLQTLF DRLSPTAIPT PKAFYVHSES APPDVWFEPT 

       670        680        690        700        710        720 
LLFEVLTADL SLSPVYKAGT SSYGKGISLR FPRFIRLRDD KTPEEATSSE QVVEFYESQS 


HVS 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU928180 Genomic DNA. Translation: CAR30077.1.
RefSeqXP_002555939.1. XM_002555893.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING559295.KLTH0H01408g.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8294252.
KEGGlth:KLTH0H01408g.

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036006.
KOK10747.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5E216_LACTC
AccessionPrimary (citable) accession number: C5E216
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: November 13, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)