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Protein

Glutamate decarboxylase

Gene

ZYRO0F12826g

Organism
Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) (Candida mogii)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:ZYRO0F12826gImported
OrganismiZygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) (Candida mogii)Imported
Taxonomic identifieri559307 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeZygosaccharomyces
ProteomesiUP000008536 Componenti: Chromosome F

Interactioni

Protein-protein interaction databases

STRINGi4956.XP_002497758.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
InParanoidiC5DYG4.
KOiK01580.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

C5DYG4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLYKHTRSQK QPRSLNQRSH PEKGLEDAAL LPEHLSKVSL SNSSQDVDPT
60 70 80 90 100
LHAPHIHYSV PEHGVPEQKA YDLIHNELTL DGNPHLNLAS FVNTESTDLA
110 120 130 140 150
KKLINENVNK NLADNDEYPQ LIELTQRCIS MISQLWKVNE NDEPIGCATT
160 170 180 190 200
GSSEAIMLGG LAMKKRWEHR MRAAGKPIDK PNIIMSSACQ VALEKFARYF
210 220 230 240 250
EVEAREVPVN AHSHHSLDPK NLWDFVDENT IGIFVILGTT YTGHFESVDA
260 270 280 290 300
TAEVLSQIES QHPEWSNKEI PIHVDGASGG FVVPFAFSDK QMATINNGNW
310 320 330 340 350
GFNNPRVVSM NASGHKFGLT TPGLGWVLWK SEDYLAEELR FKLKYLGGVE
360 370 380 390 400
ETFGLNFSRP GFQVVHQYFN LVSLGKQGYQ DRFNKSLFVA RTFCHALLHN
410 420 430 440 450
ETFPGAFEPV SSIHQRISDG STPQHPQDYW NHPELYTPGV PLVAFKLTSA
460 470 480 490 500
FHKKYPEIPQ SVISGLLRAR GWIIPNYPLP KSTDGSDKQE VLRVVFRSEM
510 520 530 540 550
SLDLALMLLQ DIEAVLGKAI RSYKAIESSV DQMNSEGAKN LIYKMLNSLT
560 570 580 590
TPDSGEDDND DADEGEKKQR REARLGNEHD HVHKNYRGTC
Length:590
Mass (Da):66,331
Last modified:July 28, 2009 - v1
Checksum:iB82B7FEE8CB4E965
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU928178 Genomic DNA. Translation: CAR28825.1.
RefSeqiXP_002497758.1. XM_002497713.1.

Genome annotation databases

GeneIDi8205525.
KEGGizro:ZYRO0F12826g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU928178 Genomic DNA. Translation: CAR28825.1.
RefSeqiXP_002497758.1. XM_002497713.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4956.XP_002497758.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi8205525.
KEGGizro:ZYRO0F12826g.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
InParanoidiC5DYG4.
KOiK01580.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparative genomics of protoploid Saccharomycetaceae."
    The Genolevures Consortium
    Genolevures Consortium, Souciet J.L., Dujon B., Gaillardin C., Johnston M., Baret P.V., Cliften P., Sherman D.J., Weissenbach J., Westhof E., Wincker P., Jubin C., Poulain J., Barbe V., Segurens B., Artiguenave F., Anthouard V., Vacherie B.
    , Val M.E., Fulton R.S., Minx P., Wilson R., Durrens P., Jean G., Marck C., Martin T., Nikolski M., Rolland T., Seret M.L., Casaregola S., Despons L., Fairhead C., Fischer G., Lafontaine I., Leh V., Lemaire M., de Montigny J., Neuveglise C., Thierry A., Blanc-Lenfle I., Bleykasten C., Diffels J., Fritsch E., Frangeul L., Goeffon A., Jauniaux N., Kachouri-Lafond R., Payen C., Potier S., Pribylova L., Ozanne C., Richard G.F., Sacerdot C., Straub M.L., Talla E.
    Genome Res. 19:1696-1709(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229Imported.

Entry informationi

Entry nameiC5DYG4_ZYGRC
AccessioniPrimary (citable) accession number: C5DYG4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: June 24, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.