Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

C5DYA8 (C5DYA8_ZYGRC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length731 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
C5DYA8 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: F47841A095211325

FASTA73182,004
        10         20         30         40         50         60 
MLARVHQLSV IGVRRFGMAT SSSQPKKQAK QATLAKFFSS VKDRNSPTKK NATPAFPTTT 

        70         80         90        100        110        120 
NVKRESPVRS NSNEKESSPM FDDSNGRSSA CSSAGLEMES APAPKKLKME SDSNSTSKNN 

       130        140        150        160        170        180 
QDDHFSTVPY ADVCNIFQEI ESTSSRLSII KICSDFFTQI VKEDSRNLVP TTYLFINKLG 

       190        200        210        220        230        240 
PDYEPGMELG LGEGLLMKTI SESCGKSLAQ VKNRYREMGD LGQIAMEARN VQPTMFKPKP 

       250        260        270        280        290        300 
LTVGEVFVNL RNIANAQGKD SQNKKIKLIK RMLTACQGVE AKFLIRSLES KLRIGLAEKT 

       310        320        330        340        350        360 
VLISLSNALL RHEQGLDVEP SDEAVDKAEQ SIRDAFCQVP NYEIVINTCL EHGISQLHKH 

       370        380        390        400        410        420 
CQLTPGIPLK PMLAKPTKAI TEVLDRFQGQ LFVSEYKYDG ERAQLHLLPD GTMRIYSRNG 

       430        440        450        460        470        480 
ENMTERYPEI DIRDFLSDPS TESLILDCEA VAWDKEQGKI LPFQVLSTRK RKDVDAKDVK 

       490        500        510        520        530        540 
VRVCLFAFDL LCHNGEPLIN KSLRERQDDL QKVTKPVDGE FRYANKLITA NIEELQHFLD 

       550        560        570        580        590        600 
QSVKDSCEGL MVKMLDGPES HYEPSKRSRN WLKLKKDYLN GVGDSLDLCV LGAYYGRGKR 

       610        620        630        640        650        660 
TGTYGGFLLG CYNQDTGEYE TCCKIGTGFS EELLQQLYDR LKPTAMEAPA AFYVYDSAQQ 

       670        680        690        700        710        720 
PDVWFEPTLL FEVLAADLSL SPVYKAGSAQ YDKGISLRFP RFLRIRDDKS VEEATSSEQV 

       730 
VDLYEAQAHL S 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU928178 Genomic DNA. Translation: CAR28769.1.
RefSeqXP_002497702.1. XM_002497657.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING559307.ZYRO0F11572g.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8205468.
KEGGzro:ZYRO0F11572g.

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036006.
KOK10747.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5DYA8_ZYGRC
AccessionPrimary (citable) accession number: C5DYA8
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: November 13, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)