C5DX17 (RSSA_ZYGRC) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
40S ribosomal protein S0

Gene names

Name:	RPS0
Ordered Locus Names:	ZYRO0F01496g

Organism

Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) (Candida mogii) [Complete proteome]

Taxonomic identifier

559307 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Zygosaccharomyces

Protein attributes

Sequence length	252 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits By similarity.
Subunit structure	Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S). Interacts with RPS21 By similarity.
Subcellular location	Cytoplasm By similarity.
Sequence similarities	Belongs to the ribosomal protein S2P family.

Ontologies

Keywords
Cellular component	Cytoplasm
Molecular function	Ribonucleoprotein Ribosomal protein
PTM	Acetylation
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Initiator methionine	1	1	Removed By similarity
	Chain	2 – 252	251	40S ribosomal protein S0		PRO_0000389293
Amino acid modifications
	Modified residue	2	1	N-acetylserine By similarity

Sequences

	Sequence		Length	Mass (Da)
	C5DX17 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: C79EC34EC5EEA177	FASTA	252	27,997
	10 20 30 40 50 60 MSLPATFDLT TEDAQLLLAA NTHLGARNVQ VHQEPYVFKT RPDGVNVVDV GKTWEKLVLA 70 80 90 100 110 120 ARIIAAIPNP EDIVAISSRT FGQRAVLKFS AHTGATPIAG RFTPGSFTNY ITRSFKEPRL 130 140 150 160 170 180 IIVTDPRSDA QAIKEASYVN IPVIALTDLD SPSEYVDVAI PCNNRGKHSI GLIWYLLARE 190 200 210 220 230 240 VLRLRGALVD RTQPWSVMPD LYFYRNPEEI EQQVAEETAG AATEEEEAKE EVTEEQTEAT 250 EWAEETTEAV AW

References

[1]

"Comparative genomics of protoploid Saccharomycetaceae." The Genolevures Consortium Souciet J.-L., Dujon B., Gaillardin C., Johnston M., Baret P.V., Cliften P., Sherman D.J., Weissenbach J., Westhof E., Wincker P., Jubin C., Poulain J., Barbe V., Segurens B., Artiguenave F., Anthouard V., Vacherie B., Val M.-E. , Fulton R.S., Minx P., Wilson R., Durrens P., Jean G., Marck C., Martin T., Nikolski M., Rolland T., Seret M.-L., Casaregola S., Despons L., Fairhead C., Fischer G., Lafontaine I., Leh V., Lemaire M., de Montigny J., Neuveglise C., Thierry A., Blanc-Lenfle I., Bleykasten C., Diffels J., Fritsch E., Frangeul L., Goeffon A., Jauniaux N., Kachouri-Lafond R., Payen C., Potier S., Pribylova L., Ozanne C., Richard G.-F., Sacerdot C., Straub M.-L., Talla E. Genome Res. 19:1696-1709(2009) [PubMed: 19525356] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU928178 Genomic DNA. Translation: CAR28328.1.
RefSeq	XP_002497261.1. XM_002497216.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C5DX17.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8205016.
GenomeReviews	Gene locus ZYRO0F01496g in contig CU928178_GR.
KEGG	zro:ZYRO0F01496g.
Phylogenomic databases
OrthoDB	EOG4KH646.
Family and domain databases
InterPro	IPR001865. Ribosomal_S2. IPR018130. Ribosomal_S2_CS. IPR005707. Ribosomal_S2_euk/arc. IPR023591. Ribosomal_S2_flav_dom. [Graphical view]
KO	K02998.
PANTHER	PTHR11489. Ribosomal_S2_e/a. 1 hit.
Pfam	PF00318. Ribosomal_S2. 2 hits. [Graphical view]
PRINTS	PR00395. RIBOSOMALS2.
SUPFAM	SSF52313. Ribosomal_S2. 1 hit.
TIGRFAMs	TIGR01012. Sa_S2_E_A. 1 hit.
PROSITE	PS00962. RIBOSOMAL_S2_1. 1 hit. PS00963. RIBOSOMAL_S2_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RSSA_ZYGRC

Accession

Primary (citable) accession number: C5DX17

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 24, 2009
Last sequence update:	July 28, 2009
Last modified:	January 25, 2012
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Fungal Protein Annotation Program