C5DWB9 (C5DWB9_ZYGRC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ZYRO0D13574p EMBL CAR28088.1

Gene names

Ordered Locus Names:

ZYRO0D13574g

Organism

Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) (Candida mogii) [Complete proteome]

Taxonomic identifier

559307 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Zygosaccharomyces

Protein attributes

Sequence length	146 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S13P family. RuleBase RU003830

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU003830
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5DWB9 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 22C2DB790ACE347F	FASTA	146	16,898
	10 20 30 40 50 60 MSLVIQEQGS FQHILRLLNT NVDGNIKVVY ALTTIKGVGR RYANLVCKKA DVDLSKRAGE 70 80 90 100 110 120 LTQEELERIV QIMQNPTQYK IPTWFLSRQK DVNDGKDHHM LANGVESKLR DDLERLKKIR 130 140 AHRGIRHFWG LRVRGQHTKT TGRKRA

References

[1]

"Comparative genomics of protoploid Saccharomycetaceae." The Genolevures Consortium Souciet J.-L., Dujon B., Gaillardin C., Johnston M., Baret P.V., Cliften P., Sherman D.J., Weissenbach J., Westhof E., Wincker P., Jubin C., Poulain J., Barbe V., Segurens B., Artiguenave F., Anthouard V., Vacherie B., Val M.-E. , Fulton R.S., Minx P., Wilson R., Durrens P., Jean G., Marck C., Martin T., Nikolski M., Rolland T., Seret M.-L., Casaregola S., Despons L., Fairhead C., Fischer G., Lafontaine I., Leh V., Lemaire M., de Montigny J., Neuveglise C., Thierry A., Blanc-Lenfle I., Bleykasten C., Diffels J., Fritsch E., Frangeul L., Goeffon A., Jauniaux N., Kachouri-Lafond R., Payen C., Potier S., Pribylova L., Ozanne C., Richard G.-F., Sacerdot C., Straub M.-L., Talla E. Genome Res. 19:1696-1709(2009) [PubMed: 19525356] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU928176 Genomic DNA. Translation: CAR28088.1.
RefSeq	XP_002497021.1. XM_002496976.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C5DWB9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8204284.
GenomeReviews	Gene locus ZYRO0D13574g in contig CU928176_GR.
KEGG	zro:ZYRO0D13574g.
Phylogenomic databases
OrthoDB	EOG437VQ7.
Family and domain databases
InterPro	IPR001892. Ribosomal_S13. IPR010979. Ribosomal_S13-like_H2TH. IPR018269. Ribosomal_S13_CS. [Graphical view]
KO	K02964.
PANTHER	PTHR10871. PTHR10871. 1 hit.
Pfam	PF00416. Ribosomal_S13. 1 hit. [Graphical view]
PIRSF	PIRSF002134. Ribosomal_S13. 1 hit.
SUPFAM	SSF46946. Ribosomal_H2TH. 1 hit.
PROSITE	PS00646. RIBOSOMAL_S13_1. 1 hit. PS50159. RIBOSOMAL_S13_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5DWB9_ZYGRC

Accession

Primary (citable) accession number: C5DWB9

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	November 16, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)