C5DUF0 (C5DUF0_ZYGRC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ZYRO0C16214p EMBL CAR27411.1

Gene names

Ordered Locus Names:

ZYRO0C16214g

Organism

Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) (Candida mogii) [Complete proteome]

Taxonomic identifier

559307 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Zygosaccharomyces › Zygosaccharomyces rouxii

Protein attributes

Sequence length	357 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	regulation of transcription from RNA polymerase II promoter in response to stress Inferred from electronic annotation. Source: InterPro
Cellular_component	nuclear chromatin Inferred from electronic annotation. Source: InterPro
Molecular_function	sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5DUF0 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 3158A9C361E5678B	FASTA	357	39,348
	10 20 30 40 50 60 MSEKKIPRPR NAFILFRQHH HRLLIDEWTA QGVDIPHNSK ISKILGVRWK SLNEQERSHW 70 80 90 100 110 120 EEQARKEKCE HEKKYPDYRY KPTRRHRRKS GKPLPLQQGS PHLPVQMTLQ HQNPQQFQSS 130 140 150 160 170 180 PTMPTQPHPH PHPTPLSAIT KGISSPAQAP TGVIHPNQQV HPPPALAPQL TPMHNLMAPG 190 200 210 220 230 240 PAAGQYRPLP YPMAPSNTRP TTGATAHHHQ PHHHPSAPVY QPYYLPLHGY LPKFSQVPSS 250 260 270 280 290 300 QVAQATTPHH HTQVTTTTPQ PPPGATGSIS GVPPGVPPPS LPSSLPPATA ISPSAVPHIP 310 320 330 340 350 AATSATAIPT PTSISSNTTS VNQEGGRAGT LPFSGGERSV NNHNWQWRGY AYPFDRR

References

[1]

"Comparative genomics of protoploid Saccharomycetaceae." The Genolevures Consortium Souciet J.-L., Dujon B., Gaillardin C., Johnston M., Baret P.V., Cliften P., Sherman D.J., Weissenbach J., Westhof E., Wincker P., Jubin C., Poulain J., Barbe V., Segurens B., Artiguenave F., Anthouard V., Vacherie B., Val M.-E. , Fulton R.S., Minx P., Wilson R., Durrens P., Jean G., Marck C., Martin T., Nikolski M., Rolland T., Seret M.-L., Casaregola S., Despons L., Fairhead C., Fischer G., Lafontaine I., Leh V., Lemaire M., de Montigny J., Neuveglise C., Thierry A., Blanc-Lenfle I., Bleykasten C., Diffels J., Fritsch E., Frangeul L., Goeffon A., Jauniaux N., Kachouri-Lafond R., Payen C., Potier S., Pribylova L., Ozanne C., Richard G.-F., Sacerdot C., Straub M.-L., Talla E. Genome Res. 19:1696-1709(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU928175 Genomic DNA. Translation: CAR27411.1.
RefSeq	XP_002496344.1. XM_002496299.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	559307.ZYRO0C16214g.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8203573.
KEGG	zro:ZYRO0C16214g.
Phylogenomic databases
eggNOG	NOG321816.
KO	K09274.
OrthoDB	EOG4936TQ.
Family and domain databases
Gene3D	1.10.30.10. 1 hit.
InterPro	IPR009071. HMG_box_dom. IPR027142. Rox1. [Graphical view]
PANTHER	PTHR10270:SF7. PTHR10270:SF7. 1 hit.
Pfam	PF00505. HMG_box. 1 hit. [Graphical view]
SMART	SM00398. HMG. 1 hit. [Graphical view]
SUPFAM	SSF47095. HMG-box. 1 hit.
PROSITE	PS50118. HMG_BOX_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5DUF0_ZYGRC

Accession

Primary (citable) accession number: C5DUF0

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)