C5DN55 (C5DN55_LACTC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
KLTH0G14300p EMBL CAR25216.1

Gene names

Ordered Locus Names:

KLTH0G14300g

Organism

Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) (Yeast) (Kluyveromyces thermotolerans) [Complete proteome] EMBL CAR25216.1

Taxonomic identifier

559295 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Lachancea › Lachancea thermotolerans

Protein attributes

Sequence length	782 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity	ATP + H2O = ADP + phosphate.
Sequence similarities	Contains 1 helicase ATP-binding domain. SAAS SAAS013020

Ontologies

Keywords
Cellular component	Nucleus SAAS SAAS013020
Ligand	ATP-binding Nucleotide-binding
Molecular function	Helicase SAAS SAAS013020 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	nucleotide-excision repair Inferred from electronic annotation. Source: InterPro
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent DNA helicase activity Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5DN55 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 231E5C0C2B91EC30	FASTA	782	89,768
	10 20 30 40 50 60 MKFYIDDLPV IFPYPKIYPE QYQYMCDIKK TLDAGGNSIL EMPSGTGKTV SLLSLAVAYQ 70 80 90 100 110 120 THYAEHRKII YCSRTMSEIE KALVELESLM DYRSKELGHK EHFRGLGLTS RKNLCLHPRV 130 140 150 160 170 180 RKERKGTVVD EKCRRMTNGQ AARKAEQDPT ANIELCDFHE NLNTMDPENY VPVGVYSFEK 190 200 210 220 230 240 LIKYCEERTM CPYFTVRRMI AMCDIMIYSY HYLLDPKISE RVSKEVSRDA IVIFDEAHNI 250 260 270 280 290 300 DNVCIESLSL DLTNDVLKRA TKGANNLNEK IQEVRQVDSQ RLQDEYEKLV NGLRAPDMLG 310 320 330 340 350 360 AEEPPVESPV LSQDLLSEAI PGNIRRAEHF VSFLKRFIEY LKTRMKVLHV ISETPNSFLQ 370 380 390 400 410 420 HLKQLTFIER KPLRFCSERL SLLVRTLEVS EIEEFTALKD IATFATLIST YEEGFVLIIE 430 440 450 460 470 480 PYEIENAAVP NPIMRFTCLD ASIAIKPVFD KFSSVIITSG TISPLDMYPK MLNFETVLQE 490 500 510 520 530 540 SYAMTLAKKS FLPMIVTKGS DQVAISSRFE IRNDPSIVRN YGSMLVEFAK ITPDGMVVFF 550 560 570 580 590 600 PSYLYMESII SMWQTMGILD EVWKYKLILV ETPDAQETSL ALETYRKACS NGRGAILLSV 610 620 630 640 650 660 ARGKVSEGID FDHHFGRTVL MIGIPFQYTE SRILKARLEF LREHYQIREN DFLSFDAMRH 670 680 690 700 710 720 AAQCLGRVLR GKDDYGVMVL ADRRFARKKG QLPKWIAQGL SDADLNLSTD MAIANTKQFL 730 740 750 760 770 780 RTMAQPTDPK DQEGVSLWNF DQLIQFQNEQ KKKKGQGFVL DTQPVEEQET SKDQDGDIQM LQ

References

[1]

"Comparative genomics of protoploid Saccharomycetaceae." The Genolevures Consortium Souciet J.-L., Dujon B., Gaillardin C., Johnston M., Baret P.V., Cliften P., Sherman D.J., Weissenbach J., Westhof E., Wincker P., Jubin C., Poulain J., Barbe V., Segurens B., Artiguenave F., Anthouard V., Vacherie B., Val M.-E. , Fulton R.S., Minx P., Wilson R., Durrens P., Jean G., Marck C., Martin T., Nikolski M., Rolland T., Seret M.-L., Casaregola S., Despons L., Fairhead C., Fischer G., Lafontaine I., Leh V., Lemaire M., de Montigny J., Neuveglise C., Thierry A., Blanc-Lenfle I., Bleykasten C., Diffels J., Fritsch E., Frangeul L., Goeffon A., Jauniaux N., Kachouri-Lafond R., Payen C., Potier S., Pribylova L., Ozanne C., Richard G.-F., Sacerdot C., Straub M.-L., Talla E. Genome Res. 19:1696-1709(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 56472 / CBS 6340 / NRRL Y-8284.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU928171 Genomic DNA. Translation: CAR25216.1.
RefSeq	XP_002555653.1. XM_002555607.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	559295.KLTH0G14300g.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8293938.
KEGG	lth:KLTH0G14300g.
Phylogenomic databases
eggNOG	COG1199.
HOGENOM	HOG000205390.
KO	K10844.
OrthoDB	EOG4G1QQH.
Family and domain databases
InterPro	IPR006555. ATP-dep_Helicase_C. IPR010614. DEAD_2. IPR002464. DNA/RNA_helicase_DEAH_CS. IPR013020. DNA_helicase_DNA-repair_Rad3. IPR010643. DUF1227. IPR014013. Helic_SF1/SF2_ATP-bd_DinG/Rad3. IPR006554. Helicase-like_DEXD_c2. IPR027417. P-loop_NTPase. IPR001945. XPGD_DNA_repair. [Graphical view]
Pfam	PF06733. DEAD_2. 1 hit. PF06777. DUF1227. 1 hit. PF13307. Helicase_C_2. 1 hit. [Graphical view]
PRINTS	PR00852. XRODRMPGMNTD.
SMART	SM00488. DEXDc2. 1 hit. SM00491. HELICc2. 1 hit. [Graphical view]
SUPFAM	SSF52540. SSF52540. 2 hits.
TIGRFAMs	TIGR00604. rad3. 1 hit.
PROSITE	PS00690. DEAH_ATP_HELICASE. 1 hit. PS51193. HELICASE_ATP_BIND_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5DN55_LACTC

Accession

Primary (citable) accession number: C5DN55

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	May 29, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)