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C5DN55 (C5DN55_LACTC) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length782 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Catalytic activity

ATP + H2O = ADP + phosphate. SAAS SAAS013020

Sequence similarities

Contains helicase ATP-binding domain. SAAS SAAS013020

Ontologies

Keywords
   Cellular componentNucleus SAAS SAAS014013
   LigandATP-binding
Nucleotide-binding
   Molecular functionHelicase SAAS SAAS013020
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processnucleotide-excision repair

Inferred from electronic annotation. Source: InterPro

   Cellular_componentnucleus

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

ATP-dependent DNA helicase activity

Inferred from electronic annotation. Source: InterPro

DNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5DN55 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 231E5C0C2B91EC30

FASTA78289,768
        10         20         30         40         50         60 
MKFYIDDLPV IFPYPKIYPE QYQYMCDIKK TLDAGGNSIL EMPSGTGKTV SLLSLAVAYQ 

        70         80         90        100        110        120 
THYAEHRKII YCSRTMSEIE KALVELESLM DYRSKELGHK EHFRGLGLTS RKNLCLHPRV 

       130        140        150        160        170        180 
RKERKGTVVD EKCRRMTNGQ AARKAEQDPT ANIELCDFHE NLNTMDPENY VPVGVYSFEK 

       190        200        210        220        230        240 
LIKYCEERTM CPYFTVRRMI AMCDIMIYSY HYLLDPKISE RVSKEVSRDA IVIFDEAHNI 

       250        260        270        280        290        300 
DNVCIESLSL DLTNDVLKRA TKGANNLNEK IQEVRQVDSQ RLQDEYEKLV NGLRAPDMLG 

       310        320        330        340        350        360 
AEEPPVESPV LSQDLLSEAI PGNIRRAEHF VSFLKRFIEY LKTRMKVLHV ISETPNSFLQ 

       370        380        390        400        410        420 
HLKQLTFIER KPLRFCSERL SLLVRTLEVS EIEEFTALKD IATFATLIST YEEGFVLIIE 

       430        440        450        460        470        480 
PYEIENAAVP NPIMRFTCLD ASIAIKPVFD KFSSVIITSG TISPLDMYPK MLNFETVLQE 

       490        500        510        520        530        540 
SYAMTLAKKS FLPMIVTKGS DQVAISSRFE IRNDPSIVRN YGSMLVEFAK ITPDGMVVFF 

       550        560        570        580        590        600 
PSYLYMESII SMWQTMGILD EVWKYKLILV ETPDAQETSL ALETYRKACS NGRGAILLSV 

       610        620        630        640        650        660 
ARGKVSEGID FDHHFGRTVL MIGIPFQYTE SRILKARLEF LREHYQIREN DFLSFDAMRH 

       670        680        690        700        710        720 
AAQCLGRVLR GKDDYGVMVL ADRRFARKKG QLPKWIAQGL SDADLNLSTD MAIANTKQFL 

       730        740        750        760        770        780 
RTMAQPTDPK DQEGVSLWNF DQLIQFQNEQ KKKKGQGFVL DTQPVEEQET SKDQDGDIQM 


LQ 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU928171 Genomic DNA. Translation: CAR25216.1.
RefSeqXP_002555653.1. XM_002555607.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING559295.KLTH0G14300g.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8293938.
KEGGlth:KLTH0G14300g.

Phylogenomic databases

eggNOGCOG1199.
HOGENOMHOG000205390.
KOK10844.
OrthoDBEOG7BKD38.

Family and domain databases

Gene3D3.40.50.300. 2 hits.
InterProIPR006555. ATP-dep_Helicase_C.
IPR010614. DEAD_2.
IPR002464. DNA/RNA_helicase_DEAH_CS.
IPR013020. DNA_helicase_DNA-repair_Rad3.
IPR010643. DUF1227.
IPR014013. Helic_SF1/SF2_ATP-bd_DinG/Rad3.
IPR006554. Helicase-like_DEXD_c2.
IPR027417. P-loop_NTPase.
IPR001945. XPGD_DNA_repair.
[Graphical view]
PfamPF06733. DEAD_2. 1 hit.
PF06777. DUF1227. 1 hit.
PF13307. Helicase_C_2. 1 hit.
[Graphical view]
PRINTSPR00852. XRODRMPGMNTD.
SMARTSM00488. DEXDc2. 1 hit.
SM00491. HELICc2. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 6 hits.
TIGRFAMsTIGR00604. rad3. 1 hit.
PROSITEPS00690. DEAH_ATP_HELICASE. 1 hit.
PS51193. HELICASE_ATP_BIND_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5DN55_LACTC
AccessionPrimary (citable) accession number: C5DN55
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: April 16, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)