C5DM33 (C5DM33_LACTC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
KLTH0G05610p EMBL CAR24844.1

Gene names

Ordered Locus Names:

KLTH0G05610g

Organism

Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) (Yeast) (Kluyveromyces thermotolerans) [Complete proteome] EMBL CAR24844.1

Taxonomic identifier

559295 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Lachancea › Lachancea thermotolerans

Protein attributes

Sequence length	422 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	mRNA splicing, via spliceosome Inferred from electronic annotation. Source: InterPro
Cellular_component	U4/U6 x U5 tri-snRNP complex Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5DM33 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 7B038558E2B634E9	FASTA	422	49,039
	10 20 30 40 50 60 MRARKEKGNS SSRDGNSARF GAGLDIDIHP ALLSENLNLI KHRDNPYLSR ERFDTVASKV 70 80 90 100 110 120 SKRYSRGLKF RTPGVLAKEL DEKRAWLAKE RELQKEQDNL RKAKVRAGEL PDESIGEQNY 130 140 150 160 170 180 LITDVPQIEW WDAIYVQSPE DWTIKTKYSK SYGTMDEDSD DEQDSESESP SVRYVQHPVP 190 200 210 220 230 240 VQAAEHAPSK PKIYLVKREQ KKIRRNRRKL LQEEHEQKIK LGLEPKPAPK VKLSNMMSVY 250 260 270 280 290 300 QNNENITDPT SWEQTVKAQA EERHQKHVET NIRRHYEAKE QKKEKAQEAP PAQAELHCRV 310 320 330 340 350 360 FRFSSLRNPK IRFKLAKNSR QLGLRGVCLR VGDGAGIIVV IGSEKNCRFY SKLVLQRIDW 370 380 390 400 410 420 TQSYVDKDSQ QFVDCSGDEA ELLWEGVVKD TRFRGWFMKE CRDESELQAV LSQFDADWLL RV

References

[1]

"Comparative genomics of protoploid Saccharomycetaceae." The Genolevures Consortium Souciet J.-L., Dujon B., Gaillardin C., Johnston M., Baret P.V., Cliften P., Sherman D.J., Weissenbach J., Westhof E., Wincker P., Jubin C., Poulain J., Barbe V., Segurens B., Artiguenave F., Anthouard V., Vacherie B., Val M.-E. , Fulton R.S., Minx P., Wilson R., Durrens P., Jean G., Marck C., Martin T., Nikolski M., Rolland T., Seret M.-L., Casaregola S., Despons L., Fairhead C., Fischer G., Lafontaine I., Leh V., Lemaire M., de Montigny J., Neuveglise C., Thierry A., Blanc-Lenfle I., Bleykasten C., Diffels J., Fritsch E., Frangeul L., Goeffon A., Jauniaux N., Kachouri-Lafond R., Payen C., Potier S., Pribylova L., Ozanne C., Richard G.-F., Sacerdot C., Straub M.-L., Talla E. Genome Res. 19:1696-1709(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 56472 / CBS 6340 / NRRL Y-8284.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CU928171 Genomic DNA. Translation: CAR24844.1.
RefSeq	XP_002555281.1. XM_002555235.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	559295.KLTH0G05610g.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8293548.
KEGG	lth:KLTH0G05610g.
Phylogenomic databases
eggNOG	NOG268901.
HOGENOM	HOG000205412.
KO	K12843.
OrthoDB	EOG4VHPGB.
Family and domain databases
InterPro	IPR010541. DUF1115. IPR013881. Pre-mRNA_splic_Prp3. IPR027104. Prp3. [Graphical view]
PANTHER	PTHR14212. PTHR14212. 1 hit.
Pfam	PF06544. DUF1115. 1 hit. PF08572. PRP3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5DM33_LACTC

Accession

Primary (citable) accession number: C5DM33

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)