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C5D498 (C5D498_GEOSW) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ROK family protein EMBL ACS25054.1
Gene names
Ordered Locus Names:GWCH70_2357 EMBL ACS25054.1
OrganismGeobacillus sp. (strain WCH70) [Complete proteome] [HAMAP] EMBL ACS25054.1
Taxonomic identifier471223 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Geobacillus

Protein attributes

Sequence length397 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
C5D498 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 918540BF47A60848

FASTA39743,445
        10         20         30         40         50         60 
MVRTGNIGLV KKINKQIVLK LIREKNNISR AEIAKITGLN KATVSALVDE LISEHFVSES 

        70         80         90        100        110        120 
GIGVSTGGRR PLMLRFNEAA GSLIGIELGV NYIYAVLTDL NAEIIWEKMC PFRANEKQET 

       130        140        150        160        170        180 
IIEKMIAMIH EAIRQAPTTP YGIMGIGIGV PGIVDAEEGL VVFAPNLHWD HVSLSSILQK 

       190        200        210        220        230        240 
QWPNYPIIIE NEAKLAALGE KWFGAGKEFA NFVYVSAGIG IGAGVIIHNQ LYRGIDGIAG 

       250        260        270        280        290        300 
EIGHHVIDVH GFRCSCGNNG CWEMYASEKY IQRRLEQEHY HSMLEGFSVE KVRALAESGD 

       310        320        330        340        350        360 
KQMAQILAEV GHYLGIGILH IIYAYNPEAV IVGSTIGKAG KWVLEPAREE VEKRILVKNG 

       370        380        390 
NGPFIIPSQL LEKSCAIGAV ASVLEKVVMP SELEVIS

« Hide

References

[1]"Complete sequence of chromosome of Geopacillus sp. WCH70."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Brumm P., Mead D.A., Richardson P.
Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: WCH70 EMBL ACS25054.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001638 Genomic DNA. Translation: ACS25054.1.
RefSeqYP_002950320.1. NC_012793.1.

3D structure databases

ProteinModelPortalC5D498.
ModBaseSearch...

Protein-protein interaction databases

STRING471223.GWCH70_2357.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS25054; ACS25054; GWCH70_2357.
GeneID7975954.
KEGGgwc:GWCH70_2357.
PATRIC21973762. VBIGeoSp101709_2483.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1940.
HOGENOMHOG000150084.
OMANAEIIWE.
ProtClustDBCLSK861634.

Enzyme and pathway databases

BioCycGSP471223:GH2C-2485-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR000600. ROK.
IPR011991. WHTH_DNA-bd_dom.
IPR026929. XylR.
[Graphical view]
PANTHERPTHR18964:SF81. PTHR18964:SF81. 1 hit.
PfamPF00480. ROK. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5D498_GEOSW
AccessionPrimary (citable) accession number: C5D498
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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