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C5D1R4

- C5D1R4_VARPS

UniProt

C5D1R4 - C5D1R4_VARPS

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Protein
Submitted name:

Aldehyde Dehydrogenase

Gene
Vapar_6271
Organism
Variovorax paradoxus (strain S110)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciVPAR543728:GHLL-6343-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aldehyde DehydrogenaseImported
Gene namesi
Ordered Locus Names:Vapar_6271Imported
OrganismiVariovorax paradoxus (strain S110)Imported
Taxonomic identifieri543728 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
ProteomesiUP000000453: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi543728.Vapar_6271.

Structurei

3D structure databases

ProteinModelPortaliC5D1R4.

Family & Domainsi

Sequence similaritiesi

Belongs to the aldehyde dehydrogenase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1012.
HOGENOMiHOG000271505.
KOiK00128.
OMAiNIDTMNT.
OrthoDBiEOG6BS8QW.

Family and domain databases

Gene3Di3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProiIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamiPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMiSSF53720. SSF53720. 1 hit.
PROSITEiPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5D1R4-1 [UniParc]FASTAAdd to Basket

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MWNIDQAYID GAFVPVQGSE RLEICNPATE RAIGTVTLAN REDAKRAIAA    50
ANRAQPALAR STRAQRIDML RRLEAAVLAR TERIREATIE EYGGPLARSQ 100
WVSNYASQCF ATTAQALRDY AFERRLGEAT VVMEPVGVAG LIAPWNAAAG 150
SICSKLASAI AAGCASVVKP SELGPLQAQA VTEALHDAGL PPGVFNVLLG 200
RGSDVGDEIA TSAGIAKISF TGSTQTGKLI ARAGVDTMKR VSLALSGKSA 250
TLVLDDADLA AALPLALNAA FMNNGQACVA GTRLLIPRAH MKAAIEQVRA 300
AAAALRVGDP RDPATAIGPL ASQAQFDRVQ HFIRRGLAQG ATLVAGGEGR 350
PDGFERGWFV RPTVFAEVRN DMDIAREEIF GPVLSMIGYG DEDEAIEIAN 400
DSPYGLQAYV FSSDAQRALR VASRLRVGTV LVNRIAPELA APFGGVKQSG 450
VGREFGVFGM EAFLEPKTIA AADGIA 476
Length:476
Mass (Da):50,080
Last modified:July 28, 2009 - v1
Checksum:iF91639A1EEC51EFB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001636 Genomic DNA. Translation: ACS22834.1.
RefSeqiYP_002948100.1. NC_012792.1.

Genome annotation databases

EnsemblBacteriaiACS22834; ACS22834; Vapar_6271.
GeneIDi7975487.
KEGGivap:Vapar_6271.
PATRICi24012972. VBIVarPar36677_6233.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001636 Genomic DNA. Translation: ACS22834.1 .
RefSeqi YP_002948100.1. NC_012792.1.

3D structure databases

ProteinModelPortali C5D1R4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 543728.Vapar_6271.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACS22834 ; ACS22834 ; Vapar_6271 .
GeneIDi 7975487.
KEGGi vap:Vapar_6271.
PATRICi 24012972. VBIVarPar36677_6233.

Phylogenomic databases

eggNOGi COG1012.
HOGENOMi HOG000271505.
KOi K00128.
OMAi NIDTMNT.
OrthoDBi EOG6BS8QW.

Enzyme and pathway databases

BioCyci VPAR543728:GHLL-6343-MONOMER.

Family and domain databases

Gene3Di 3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProi IPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view ]
Pfami PF00171. Aldedh. 1 hit.
[Graphical view ]
SUPFAMi SSF53720. SSF53720. 1 hit.
PROSITEi PS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
    Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
    J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S110.

Entry informationi

Entry nameiC5D1R4_VARPS
AccessioniPrimary (citable) accession number: C5D1R4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: June 11, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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