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Protein
Submitted name:

Aldehyde Dehydrogenase

Gene

Vapar_6271

Organism
Variovorax paradoxus (strain S110)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciVPAR543728:GHLL-6343-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aldehyde DehydrogenaseImported
Gene namesi
Ordered Locus Names:Vapar_6271Imported
OrganismiVariovorax paradoxus (strain S110)Imported
Taxonomic identifieri543728 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
ProteomesiUP000000453 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi543728.Vapar_6271.

Structurei

3D structure databases

ProteinModelPortaliC5D1R4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the aldehyde dehydrogenase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1012.
HOGENOMiHOG000271505.
KOiK00128.
OMAiHEADTEI.
OrthoDBiEOG6BS8QW.

Family and domain databases

Gene3Di3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProiIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamiPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMiSSF53720. SSF53720. 1 hit.
PROSITEiPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5D1R4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWNIDQAYID GAFVPVQGSE RLEICNPATE RAIGTVTLAN REDAKRAIAA
60 70 80 90 100
ANRAQPALAR STRAQRIDML RRLEAAVLAR TERIREATIE EYGGPLARSQ
110 120 130 140 150
WVSNYASQCF ATTAQALRDY AFERRLGEAT VVMEPVGVAG LIAPWNAAAG
160 170 180 190 200
SICSKLASAI AAGCASVVKP SELGPLQAQA VTEALHDAGL PPGVFNVLLG
210 220 230 240 250
RGSDVGDEIA TSAGIAKISF TGSTQTGKLI ARAGVDTMKR VSLALSGKSA
260 270 280 290 300
TLVLDDADLA AALPLALNAA FMNNGQACVA GTRLLIPRAH MKAAIEQVRA
310 320 330 340 350
AAAALRVGDP RDPATAIGPL ASQAQFDRVQ HFIRRGLAQG ATLVAGGEGR
360 370 380 390 400
PDGFERGWFV RPTVFAEVRN DMDIAREEIF GPVLSMIGYG DEDEAIEIAN
410 420 430 440 450
DSPYGLQAYV FSSDAQRALR VASRLRVGTV LVNRIAPELA APFGGVKQSG
460 470
VGREFGVFGM EAFLEPKTIA AADGIA
Length:476
Mass (Da):50,080
Last modified:July 28, 2009 - v1
Checksum:iF91639A1EEC51EFB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001636 Genomic DNA. Translation: ACS22834.1.
RefSeqiWP_015866294.1. NC_012792.1.
YP_002948100.1. NC_012792.1.

Genome annotation databases

EnsemblBacteriaiACS22834; ACS22834; Vapar_6271.
KEGGivap:Vapar_6271.
PATRICi24012972. VBIVarPar36677_6233.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001636 Genomic DNA. Translation: ACS22834.1.
RefSeqiWP_015866294.1. NC_012792.1.
YP_002948100.1. NC_012792.1.

3D structure databases

ProteinModelPortaliC5D1R4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi543728.Vapar_6271.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACS22834; ACS22834; Vapar_6271.
KEGGivap:Vapar_6271.
PATRICi24012972. VBIVarPar36677_6233.

Phylogenomic databases

eggNOGiCOG1012.
HOGENOMiHOG000271505.
KOiK00128.
OMAiHEADTEI.
OrthoDBiEOG6BS8QW.

Enzyme and pathway databases

BioCyciVPAR543728:GHLL-6343-MONOMER.

Family and domain databases

Gene3Di3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProiIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS_CYS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamiPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMiSSF53720. SSF53720. 1 hit.
PROSITEiPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
    Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
    J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S110Imported.

Entry informationi

Entry nameiC5D1R4_VARPS
AccessioniPrimary (citable) accession number: C5D1R4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 27, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.