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C5CZV6 (C5CZV6_VARPS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Vapar_5431 EMBL ACS22027.1
OrganismVariovorax paradoxus (strain S110) [Complete proteome] [HAMAP] EMBL ACS22027.1
Taxonomic identifier543728 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax

Protein attributes

Sequence length299 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the GST superfamily. RuleBase RU003494

Ontologies

Keywords
   Molecular functionTransferase EMBL ACS22027.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functiontransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5CZV6 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 4E1891021100E7A8

FASTA29933,584
        10         20         30         40         50         60 
MKLFYMPGAS ALADHIVLEW SGQPYEAVRM DRRSIKMPEY LALNPAGVVP LLVHGDFTLS 

        70         80         90        100        110        120 
ENVAILGYLA DLHPQLQLAG DGSPRARAEV MRWLGFLNSD VHKAFRPIFF PERYLPDGGL 

       130        140        150        160        170        180 
AAQLAATARG HVREYLGRLD AQLEGREWLT GRRSIADAYH FVMLRWAIGT KVGLHGFENL 

       190        200        210        220        230        240 
TAFVRRMHAD EGVHAALVME EGLAPRTERA HSAPDQLMRL NERIRDNLAT TLNAEVVGLV 

       250        260        270        280        290 
EYSEGDGAEL EVRRGLVEIE VSRMDTVFSW RDENYRGQAA IPFENFSRYV SNGAIRLDL 

« Hide

References

[1]"Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S110.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001636 Genomic DNA. Translation: ACS22027.1.
RefSeqYP_002947293.1. NC_012792.1.

3D structure databases

ProteinModelPortalC5CZV6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING543728.Vapar_5431.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS22027; ACS22027; Vapar_5431.
GeneID7975125.
KEGGvap:Vapar_5431.
PATRIC24011370. VBIVarPar36677_5446.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0625.
HOGENOMHOG000125748.
KOK00799.
OMAPRTERAH.
OrthoDBEOG6H1Q01.

Enzyme and pathway databases

BioCycVPAR543728:GHLL-5488-MONOMER.

Family and domain databases

Gene3D1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR004046. GST_C.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamPF00043. GST_C. 1 hit.
PF02798. GST_N. 1 hit.
[Graphical view]
SUPFAMSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5CZV6_VARPS
AccessionPrimary (citable) accession number: C5CZV6
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: April 16, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)