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C5CW07 (C5CW07_VARPS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Vapar_0042 EMBL ACS16705.1
OrganismVariovorax paradoxus (strain S110) [Complete proteome] [HAMAP] EMBL ACS16705.1
Taxonomic identifier543728 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax

Protein attributes

Sequence length202 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the GST superfamily. RuleBase RU003494

Ontologies

Keywords
   Molecular functionTransferase EMBL ACS16705.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functiontransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5CW07 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: D2708CE77659702B

FASTA20222,384
        10         20         30         40         50         60 
MKLYYSPGAC SLSPHIALHE AGLAFEPVLA STKTHKLQDG TDYYGINPLG YVPMLELDDG 

        70         80         90        100        110        120 
TRLREGPAIV QYIADLAPTK NLAPAAGTLQ RYRLQEWLTF IGTEMHKGYS PLFNPNMPEE 

       130        140        150        160        170        180 
AKAIFKDKLK SRYQWLDGQL ADKQYLMGEQ FSVADGYLFT VTNWAKSTGV DISGFANLQA 

       190        200 
WHARVAARPA VQAAMKAEGL LK 

« Hide

References

[1]"Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S110.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001635 Genomic DNA. Translation: ACS16705.1.
RefSeqYP_002941971.1. NC_012791.1.

3D structure databases

ProteinModelPortalC5CW07.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING543728.Vapar_0042.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS16705; ACS16705; Vapar_0042.
GeneID7974000.
KEGGvap:Vapar_0042.
PATRIC24000454. VBIVarPar36677_0042.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0625.
HOGENOMHOG000125748.
KOK00799.
OMAEIHKGFS.
OrthoDBEOG6H1Q01.
ProtClustDBCLSK950929.

Enzyme and pathway databases

BioCycVPAR543728:GHLL-42-MONOMER.

Family and domain databases

Gene3D1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR004046. GST_C.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamPF00043. GST_C. 1 hit.
PF02798. GST_N. 1 hit.
[Graphical view]
SUPFAMSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5CW07_VARPS
AccessionPrimary (citable) accession number: C5CW07
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: April 16, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)