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Protein
Submitted name:

Glutathione S-transferase domain protein

Gene

Vapar_0042

Organism
Variovorax paradoxus (strain S110)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

TransferaseImported

Enzyme and pathway databases

BioCyciVPAR543728:GHLL-42-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glutathione S-transferase domain proteinImported
Gene namesi
Ordered Locus Names:Vapar_0042Imported
OrganismiVariovorax paradoxus (strain S110)Imported
Taxonomic identifieri543728 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
ProteomesiUP000000453 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi543728.Vapar_0042.

Structurei

3D structure databases

ProteinModelPortaliC5CW07.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GST superfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0625.
HOGENOMiHOG000125748.
KOiK00799.
OMAiSHKLQDG.
OrthoDBiEOG6H1Q01.

Family and domain databases

Gene3Di1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProiIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR004046. GST_C.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF00043. GST_C. 1 hit.
PF02798. GST_N. 1 hit.
[Graphical view]
SUPFAMiSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEiPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5CW07-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLYYSPGAC SLSPHIALHE AGLAFEPVLA STKTHKLQDG TDYYGINPLG
60 70 80 90 100
YVPMLELDDG TRLREGPAIV QYIADLAPTK NLAPAAGTLQ RYRLQEWLTF
110 120 130 140 150
IGTEMHKGYS PLFNPNMPEE AKAIFKDKLK SRYQWLDGQL ADKQYLMGEQ
160 170 180 190 200
FSVADGYLFT VTNWAKSTGV DISGFANLQA WHARVAARPA VQAAMKAEGL

LK
Length:202
Mass (Da):22,384
Last modified:July 28, 2009 - v1
Checksum:iD2708CE77659702B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001635 Genomic DNA. Translation: ACS16705.1.
RefSeqiWP_012745207.1. NC_012791.1.
YP_002941971.1. NC_012791.1.

Genome annotation databases

EnsemblBacteriaiACS16705; ACS16705; Vapar_0042.
KEGGivap:Vapar_0042.
PATRICi24000454. VBIVarPar36677_0042.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001635 Genomic DNA. Translation: ACS16705.1.
RefSeqiWP_012745207.1. NC_012791.1.
YP_002941971.1. NC_012791.1.

3D structure databases

ProteinModelPortaliC5CW07.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi543728.Vapar_0042.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACS16705; ACS16705; Vapar_0042.
KEGGivap:Vapar_0042.
PATRICi24000454. VBIVarPar36677_0042.

Phylogenomic databases

eggNOGiCOG0625.
HOGENOMiHOG000125748.
KOiK00799.
OMAiSHKLQDG.
OrthoDBiEOG6H1Q01.

Enzyme and pathway databases

BioCyciVPAR543728:GHLL-42-MONOMER.

Family and domain databases

Gene3Di1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProiIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR004046. GST_C.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF00043. GST_C. 1 hit.
PF02798. GST_N. 1 hit.
[Graphical view]
SUPFAMiSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEiPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
    Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
    J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S110Imported.

Entry informationi

Entry nameiC5CW07_VARPS
AccessioniPrimary (citable) accession number: C5CW07
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: April 29, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.