SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

C5CVE3

- C5CVE3_VARPS

UniProt

C5CVE3 - C5CVE3_VARPS

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene
Vapar_1945
Organism
Variovorax paradoxus (strain S110)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciVPAR543728:GHLL-1960-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Vapar_1945Imported
OrganismiVariovorax paradoxus (strain S110)Imported
Taxonomic identifieri543728 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
ProteomesiUP000000453: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi543728.Vapar_1945.

Structurei

3D structure databases

ProteinModelPortaliC5CVE3.

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiFECAGDP.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5CVE3-1 [UniParc]FASTAAdd to Basket

« Hide

MTVAERIRAR YLIETPLDPA AVAEVMAGEQ SCGTFTRVEG ETDALRERAR    50
ATVEAITELA PAEAPSLPNA MLERKGTRGP WRRAHIDISF PVANIGANLP 100
TLAATVSGNL YDLGEVTGLR LESLQLPAAY RAQFEMPRAG IAGTRRITGV 150
ASGALVGTII KPNVGLSAGE TAELVARLCA AGVDFIKDDE VCANPAHAPL 200
AERVPAVMAV VRAHQQRTGK HVMVAFNITD ETDAMKRHAD LVEREGGSCV 250
MASLNWCGHS GMQTLRRHTG LALHGHRNGY GALSRHPLLG ISFQAYQTLW 300
RLAGVDHMHV HGLQGKFSQP DSEVIESARD CFTPLTDAAD DRVMPAFSSG 350
QWAGTVPATW AAICSDDLLF MAGGGILAHP DGAAAGVTSI RQAWSAARAG 400
TALQEAARGA PELARALAFF GKP 423
Length:423
Mass (Da):44,844
Last modified:July 28, 2009 - v1
Checksum:iEC8DED0C62B33C81
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001635 Genomic DNA. Translation: ACS18592.1.
RefSeqiYP_002943858.1. NC_012791.1.

Genome annotation databases

EnsemblBacteriaiACS18592; ACS18592; Vapar_1945.
GeneIDi7971124.
KEGGivap:Vapar_1945.
PATRICi24004336. VBIVarPar36677_1970.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001635 Genomic DNA. Translation: ACS18592.1 .
RefSeqi YP_002943858.1. NC_012791.1.

3D structure databases

ProteinModelPortali C5CVE3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 543728.Vapar_1945.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACS18592 ; ACS18592 ; Vapar_1945 .
GeneIDi 7971124.
KEGGi vap:Vapar_1945.
PATRICi 24004336. VBIVarPar36677_1970.

Phylogenomic databases

eggNOGi COG1850.
HOGENOMi HOG000230831.
KOi K01601.
OMAi FECAGDP.
OrthoDBi EOG62K1SK.

Enzyme and pathway databases

BioCyci VPAR543728:GHLL-1960-MONOMER.

Family and domain databases

Gene3Di 3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProi IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view ]
Pfami PF00016. RuBisCO_large. 1 hit.
[Graphical view ]
SUPFAMi SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
    Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
    J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S110.

Entry informationi

Entry nameiC5CVE3_VARPS
AccessioniPrimary (citable) accession number: C5CVE3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 14, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi