C5CVE3 (C5CVE3_VARPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose-bisphosphate carboxylase EMBL ACS18592.1
EC=4.1.1.39 EMBL ACS18592.1

Gene names

Ordered Locus Names:

Vapar_1945

Organism

Variovorax paradoxus (strain S110) [Complete proteome] [HAMAP]

Taxonomic identifier

543728 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Variovorax › Variovorax paradoxus

Protein attributes

Sequence length	423 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL ACS18592.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5CVE3 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: EC8DED0C62B33C81	FASTA	423	44,844
	10 20 30 40 50 60 MTVAERIRAR YLIETPLDPA AVAEVMAGEQ SCGTFTRVEG ETDALRERAR ATVEAITELA 70 80 90 100 110 120 PAEAPSLPNA MLERKGTRGP WRRAHIDISF PVANIGANLP TLAATVSGNL YDLGEVTGLR 130 140 150 160 170 180 LESLQLPAAY RAQFEMPRAG IAGTRRITGV ASGALVGTII KPNVGLSAGE TAELVARLCA 190 200 210 220 230 240 AGVDFIKDDE VCANPAHAPL AERVPAVMAV VRAHQQRTGK HVMVAFNITD ETDAMKRHAD 250 260 270 280 290 300 LVEREGGSCV MASLNWCGHS GMQTLRRHTG LALHGHRNGY GALSRHPLLG ISFQAYQTLW 310 320 330 340 350 360 RLAGVDHMHV HGLQGKFSQP DSEVIESARD CFTPLTDAAD DRVMPAFSSG QWAGTVPATW 370 380 390 400 410 420 AAICSDDLLF MAGGGILAHP DGAAAGVTSI RQAWSAARAG TALQEAARGA PELARALAFF GKP

References

[1]

"Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110." Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C. J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S110.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001635 Genomic DNA. Translation: ACS18592.1.
RefSeq	YP_002943858.1. NC_012791.1.
3D structure databases
ProteinModelPortal	C5CVE3.
ModBase	Search...
Protein-protein interaction databases
STRING	543728.Vapar_1945.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACS18592; ACS18592; Vapar_1945.
GeneID	7971124.
KEGG	vap:Vapar_1945.
PATRIC	24004336. VBIVarPar36677_1970.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1850.
HOGENOM	HOG000230831.
KO	K01601.
OMA	NITDEVD.
ProtClustDB	CLSK952754.
Enzyme and pathway databases
BioCyc	VPAR543728:GHLL-1960-MONOMER.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR020878. RuBisCo_large_chain_AS. IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
PROSITE	PS00157. RUBISCO_LARGE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5CVE3_VARPS

Accession

Primary (citable) accession number: C5CVE3

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	May 29, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)