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C5CVE3

- C5CVE3_VARPS

UniProt

C5CVE3 - C5CVE3_VARPS

Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Vapar_1945

Organism
Variovorax paradoxus (strain S110)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (28 Jul 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Keywords - Molecular functioni

    LyaseImported

    Enzyme and pathway databases

    BioCyciVPAR543728:GHLL-1960-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
    Gene namesi
    Ordered Locus Names:Vapar_1945Imported
    OrganismiVariovorax paradoxus (strain S110)Imported
    Taxonomic identifieri543728 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
    ProteomesiUP000000453: Chromosome 1

    Interactioni

    Protein-protein interaction databases

    STRINGi543728.Vapar_1945.

    Structurei

    3D structure databases

    ProteinModelPortaliC5CVE3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1850.
    HOGENOMiHOG000230831.
    KOiK01601.
    OMAiFECAGDP.
    OrthoDBiEOG62K1SK.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProiIPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 1 hit.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5CVE3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTVAERIRAR YLIETPLDPA AVAEVMAGEQ SCGTFTRVEG ETDALRERAR    50
    ATVEAITELA PAEAPSLPNA MLERKGTRGP WRRAHIDISF PVANIGANLP 100
    TLAATVSGNL YDLGEVTGLR LESLQLPAAY RAQFEMPRAG IAGTRRITGV 150
    ASGALVGTII KPNVGLSAGE TAELVARLCA AGVDFIKDDE VCANPAHAPL 200
    AERVPAVMAV VRAHQQRTGK HVMVAFNITD ETDAMKRHAD LVEREGGSCV 250
    MASLNWCGHS GMQTLRRHTG LALHGHRNGY GALSRHPLLG ISFQAYQTLW 300
    RLAGVDHMHV HGLQGKFSQP DSEVIESARD CFTPLTDAAD DRVMPAFSSG 350
    QWAGTVPATW AAICSDDLLF MAGGGILAHP DGAAAGVTSI RQAWSAARAG 400
    TALQEAARGA PELARALAFF GKP 423
    Length:423
    Mass (Da):44,844
    Last modified:July 28, 2009 - v1
    Checksum:iEC8DED0C62B33C81
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001635 Genomic DNA. Translation: ACS18592.1.
    RefSeqiYP_002943858.1. NC_012791.1.

    Genome annotation databases

    EnsemblBacteriaiACS18592; ACS18592; Vapar_1945.
    GeneIDi7971124.
    KEGGivap:Vapar_1945.
    PATRICi24004336. VBIVarPar36677_1970.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001635 Genomic DNA. Translation: ACS18592.1 .
    RefSeqi YP_002943858.1. NC_012791.1.

    3D structure databases

    ProteinModelPortali C5CVE3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 543728.Vapar_1945.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACS18592 ; ACS18592 ; Vapar_1945 .
    GeneIDi 7971124.
    KEGGi vap:Vapar_1945.
    PATRICi 24004336. VBIVarPar36677_1970.

    Phylogenomic databases

    eggNOGi COG1850.
    HOGENOMi HOG000230831.
    KOi K01601.
    OMAi FECAGDP.
    OrthoDBi EOG62K1SK.

    Enzyme and pathway databases

    BioCyci VPAR543728:GHLL-1960-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProi IPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
      Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
      J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S110Imported.

    Entry informationi

    Entry nameiC5CVE3_VARPS
    AccessioniPrimary (citable) accession number: C5CVE3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3