Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

C5CU44 (C5CU44_VARPS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Vapar_1744 EMBL ACS18394.1
OrganismVariovorax paradoxus (strain S110) [Complete proteome] [HAMAP] EMBL ACS18394.1
Taxonomic identifier543728 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax

Protein attributes

Sequence length221 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the GST superfamily. RuleBase RU003494

Ontologies

Keywords
   Molecular functionTransferase EMBL ACS18394.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functiontransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5CU44 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 468ADEB8A146D03F

FASTA22124,796
        10         20         30         40         50         60 
MKTQIYSAPL SMFGAKVQIA ALEKGVDFEL VMVPFTKDDT YEPKHPEVLR VNPVKQQVPI 

        70         80         90        100        110        120 
LIDGDVELFD STQIFEYLED RYPSPALWPR GIAERARARQ LEQKSDEVFF PNVIRLFGLQ 

       130        140        150        160        170        180 
HDMQSAPAVA ACAACARYYE EMEGLLATRE YLAGPYSFAD IAFYMAHVFA DRKGAGMTGA 

       190        200        210        220 
TPRLVAWRGR VGERPAVRAA VDPMMRFLAS EGRGVPAFLQ R 

« Hide

References

[1]"Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S110.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001635 Genomic DNA. Translation: ACS18394.1.
RefSeqYP_002943660.1. NC_012791.1.

3D structure databases

ProteinModelPortalC5CU44.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING543728.Vapar_1744.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS18394; ACS18394; Vapar_1744.
GeneID7974486.
KEGGvap:Vapar_1744.
PATRIC24003932. VBIVarPar36677_1771.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0625.
HOGENOMHOG000082249.
KOK00799.
OMAADIAFYM.
OrthoDBEOG6TN453.
ProtClustDBCLSK941477.

Enzyme and pathway databases

BioCycVPAR543728:GHLL-1756-MONOMER.

Family and domain databases

Gene3D1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR004046. GST_C.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamPF00043. GST_C. 1 hit.
PF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5CU44_VARPS
AccessionPrimary (citable) accession number: C5CU44
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: April 16, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)