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C5CSC6

- C5CSC6_VARPS

UniProt

C5CSC6 - C5CSC6_VARPS

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Variovorax paradoxus (strain S110)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (28 Jul 2009)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei154 – 1541UniRule annotation
    Active sitei599 – 5991UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Enzyme and pathway databases

    BioCyciVPAR543728:GHLL-1382-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotation
    Ordered Locus Names:Vapar_1373Imported
    OrganismiVariovorax paradoxus (strain S110)Imported
    Taxonomic identifieri543728 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
    ProteomesiUP000000453: Chromosome 1

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Protein-protein interaction databases

    STRINGi543728.Vapar_1373.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2352.
    HOGENOMiHOG000238647.
    KOiK01595.
    OMAiELSTISC.
    OrthoDBiEOG6TJ7T8.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C5CSC6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKASKTPAPP KRRQAEDQPL IDDIRLLGRI LGDVIREQEG EESYALVEKI    50
    RTLSVAFRRD ADQAADRALK NLLKGLSAAE TVRVIRAFTY FSHLANLAED 100
    RHLIRRRTEA ERAGESADGD LQTALARIRK AGVKPDEVVA SLARSYVSPV 150
    LTAHPTEVQR KSILDAERAI AQLLTTRDEI KLRQSAYAGA KDALTPLEFA 200
    ENETQMRIRV TQIWQTRLLR FSKLTVADEI ENALSYYEAT FLREIPRVYA 250
    DLEKALGQGG VLPSVAPFLR MGQWIGGDRD GNPNVTAETL EYALRRQAEL 300
    ALRHYLTEVH YLGGELSLSA TLVDVSVEMQ ALAARSPDTS EHRKDEPYRR 350
    ALTGVYARLA ATLRDLTGGE AARHAVPPQN PYAKAEEFLD DLRTVEESLV 400
    EKHGSVLAAP RLRPLIRAVE VFGFHLATVD LRQSSDKHEA VIAELLATAR 450
    IEPAYASLAE EAKQTLLLKL LDDARPLRVP DAEYSPLAQS ELAIFAAART 500
    ARARYGAAAI RHYIISHTET VSDLLEALLL QKEVGLLRGA MNGKATCDLI 550
    VVPLFETIED LRNAAPIVRA FYALPNIQAL IERSGAEQDV MLGYSDSNKD 600
    GGIFTSNWEL YRAGIALVAL FDELNKKKAN PIRLRMFHGR GGTVGRGGGP 650
    SYQAILAQPP GTVRGQIRLT EQGEVIGSKY ANREIGRRNL ETLVAATLEA 700
    TLLPQAKSAP ATFLSAAGEL STASMSAYRK LVYETPGFGD YFFGSTPIRE 750
    IAELNIGSRP ASRNPSHKID DLRAVPWSFS WGQCRLTIPG WFGFGSGVEQ 800
    FLASAATPAA RKERTALLRR MYAQWPFFRT LLSNMDMVLA KSDLALASRY 850
    AELVTDRKLR QKVFSMIDTE WHRTSDALTL ITGAKQRLEG NAEMQRSVRH 900
    RFPYIDPLHH LQVELMRRYR AGEGGERLQR GIHISINGVA AGLRNTG 947
    Length:947
    Mass (Da):104,960
    Last modified:July 28, 2009 - v1
    Checksum:i4DA0808176344CFE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001635 Genomic DNA. Translation: ACS18024.1.
    RefSeqiYP_002943290.1. NC_012791.1.

    Genome annotation databases

    EnsemblBacteriaiACS18024; ACS18024; Vapar_1373.
    GeneIDi7973054.
    KEGGivap:Vapar_1373.
    PATRICi24003170. VBIVarPar36677_1392.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001635 Genomic DNA. Translation: ACS18024.1 .
    RefSeqi YP_002943290.1. NC_012791.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 543728.Vapar_1373.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACS18024 ; ACS18024 ; Vapar_1373 .
    GeneIDi 7973054.
    KEGGi vap:Vapar_1373.
    PATRICi 24003170. VBIVarPar36677_1392.

    Phylogenomic databases

    eggNOGi COG2352.
    HOGENOMi HOG000238647.
    KOi K01595.
    OMAi ELSTISC.
    OrthoDBi EOG6TJ7T8.

    Enzyme and pathway databases

    BioCyci VPAR543728:GHLL-1382-MONOMER.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
      Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
      J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S110Imported.

    Entry informationi

    Entry nameiC5CSC6_VARPS
    AccessioniPrimary (citable) accession number: C5CSC6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3