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C5CSC6 (C5CSC6_VARPS) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595

Short name=PEPC HAMAP-Rule MF_00595
Short name=PEPCase HAMAP-Rule MF_00595
EC=4.1.1.31 HAMAP-Rule MF_00595
Gene names
Name:ppc HAMAP-Rule MF_00595
Ordered Locus Names:Vapar_1373 EMBL ACS18024.1
OrganismVariovorax paradoxus (strain S110) [Complete proteome] [HAMAP] EMBL ACS18024.1
Taxonomic identifier543728 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax

Protein attributes

Sequence length947 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595 SAAS SAAS021135

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595 SAAS SAAS021135

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1541 By similarity HAMAP-Rule MF_00595
Active site5991 By similarity HAMAP-Rule MF_00595

Sequences

Sequence LengthMass (Da)Tools
C5CSC6 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 4DA0808176344CFE

FASTA947104,960
        10         20         30         40         50         60 
MKASKTPAPP KRRQAEDQPL IDDIRLLGRI LGDVIREQEG EESYALVEKI RTLSVAFRRD 

        70         80         90        100        110        120 
ADQAADRALK NLLKGLSAAE TVRVIRAFTY FSHLANLAED RHLIRRRTEA ERAGESADGD 

       130        140        150        160        170        180 
LQTALARIRK AGVKPDEVVA SLARSYVSPV LTAHPTEVQR KSILDAERAI AQLLTTRDEI 

       190        200        210        220        230        240 
KLRQSAYAGA KDALTPLEFA ENETQMRIRV TQIWQTRLLR FSKLTVADEI ENALSYYEAT 

       250        260        270        280        290        300 
FLREIPRVYA DLEKALGQGG VLPSVAPFLR MGQWIGGDRD GNPNVTAETL EYALRRQAEL 

       310        320        330        340        350        360 
ALRHYLTEVH YLGGELSLSA TLVDVSVEMQ ALAARSPDTS EHRKDEPYRR ALTGVYARLA 

       370        380        390        400        410        420 
ATLRDLTGGE AARHAVPPQN PYAKAEEFLD DLRTVEESLV EKHGSVLAAP RLRPLIRAVE 

       430        440        450        460        470        480 
VFGFHLATVD LRQSSDKHEA VIAELLATAR IEPAYASLAE EAKQTLLLKL LDDARPLRVP 

       490        500        510        520        530        540 
DAEYSPLAQS ELAIFAAART ARARYGAAAI RHYIISHTET VSDLLEALLL QKEVGLLRGA 

       550        560        570        580        590        600 
MNGKATCDLI VVPLFETIED LRNAAPIVRA FYALPNIQAL IERSGAEQDV MLGYSDSNKD 

       610        620        630        640        650        660 
GGIFTSNWEL YRAGIALVAL FDELNKKKAN PIRLRMFHGR GGTVGRGGGP SYQAILAQPP 

       670        680        690        700        710        720 
GTVRGQIRLT EQGEVIGSKY ANREIGRRNL ETLVAATLEA TLLPQAKSAP ATFLSAAGEL 

       730        740        750        760        770        780 
STASMSAYRK LVYETPGFGD YFFGSTPIRE IAELNIGSRP ASRNPSHKID DLRAVPWSFS 

       790        800        810        820        830        840 
WGQCRLTIPG WFGFGSGVEQ FLASAATPAA RKERTALLRR MYAQWPFFRT LLSNMDMVLA 

       850        860        870        880        890        900 
KSDLALASRY AELVTDRKLR QKVFSMIDTE WHRTSDALTL ITGAKQRLEG NAEMQRSVRH 

       910        920        930        940 
RFPYIDPLHH LQVELMRRYR AGEGGERLQR GIHISINGVA AGLRNTG 

« Hide

References

[1]"Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S110.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001635 Genomic DNA. Translation: ACS18024.1.
RefSeqYP_002943290.1. NC_012791.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING543728.Vapar_1373.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS18024; ACS18024; Vapar_1373.
GeneID7973054.
KEGGvap:Vapar_1373.
PATRIC24003170. VBIVarPar36677_1392.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2352.
HOGENOMHOG000238647.
KOK01595.
OMAAIPWVFG.
OrthoDBEOG6TJ7T8.
ProtClustDBPRK00009.

Enzyme and pathway databases

BioCycVPAR543728:GHLL-1382-MONOMER.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5CSC6_VARPS
AccessionPrimary (citable) accession number: C5CSC6
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: February 19, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)