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C5CPR1 (C5CPR1_VARPS) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ACS19650.1
Gene names
Ordered Locus Names:Vapar_3031 EMBL ACS19650.1
OrganismVariovorax paradoxus (strain S110) [Complete proteome] [HAMAP] EMBL ACS19650.1
Taxonomic identifier543728 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax

Protein attributes

Sequence length139 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ACS19650.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5CPR1 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: AA0825143E594DFF

FASTA13915,940
        10         20         30         40         50         60 
MRITQGTFSF LPDLSDEQIS RQVEYCLGKG WAIGLEYTDD PHPRNTFWEM FGNPMFDIKD 

        70         80         90        100        110        120 
AAGVMLELAA CRKTFPQQYI RVTAFDSTHG TESVVMSFIV NRPSNEPGFR LIRTEEPGRT 

       130 
IRYSLESYAV QARPEGSRY 

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References

[1]"Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S110.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001635 Genomic DNA. Translation: ACS19650.1.
RefSeqYP_002944916.1. NC_012791.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING543728.Vapar_3031.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS19650; ACS19650; Vapar_3031.
GeneID7973751.
KEGGvap:Vapar_3031.
PATRIC24006471. VBIVarPar36677_3024.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4451.
HOGENOMHOG000141331.
KOK01602.
OMAMFDLKDA.
OrthoDBEOG6RC3Q7.

Enzyme and pathway databases

BioCycVPAR543728:GHLL-3060-MONOMER.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC5CPR1_VARPS
AccessionPrimary (citable) accession number: C5CPR1
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 14, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)