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C5CPR1

- C5CPR1_VARPS

UniProt

C5CPR1 - C5CPR1_VARPS

Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Vapar_3031

Organism
Variovorax paradoxus (strain S110)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
  1. Functioni

    GO - Molecular functioni

    1. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    LyaseImported

    Enzyme and pathway databases

    BioCyciVPAR543728:GHLL-3060-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
    Gene namesi
    Ordered Locus Names:Vapar_3031Imported
    OrganismiVariovorax paradoxus (strain S110)Imported
    Taxonomic identifieri543728 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
    ProteomesiUP000000453: Chromosome 1

    Interactioni

    Protein-protein interaction databases

    STRINGi543728.Vapar_3031.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG4451.
    HOGENOMiHOG000141331.
    KOiK01602.
    OMAiMFDLKDA.
    OrthoDBiEOG6RC3Q7.

    Family and domain databases

    Gene3Di3.30.190.10. 1 hit.
    InterProiIPR000894. RuBisCO_sc_dom.
    [Graphical view]
    PfamiPF00101. RuBisCO_small. 1 hit.
    [Graphical view]
    SMARTiSM00961. RuBisCO_small. 1 hit.
    [Graphical view]
    SUPFAMiSSF55239. SSF55239. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C5CPR1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRITQGTFSF LPDLSDEQIS RQVEYCLGKG WAIGLEYTDD PHPRNTFWEM    50
    FGNPMFDIKD AAGVMLELAA CRKTFPQQYI RVTAFDSTHG TESVVMSFIV 100
    NRPSNEPGFR LIRTEEPGRT IRYSLESYAV QARPEGSRY 139
    Length:139
    Mass (Da):15,940
    Last modified:July 28, 2009 - v1
    Checksum:iAA0825143E594DFF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001635 Genomic DNA. Translation: ACS19650.1.
    RefSeqiYP_002944916.1. NC_012791.1.

    Genome annotation databases

    EnsemblBacteriaiACS19650; ACS19650; Vapar_3031.
    GeneIDi7973751.
    KEGGivap:Vapar_3031.
    PATRICi24006471. VBIVarPar36677_3024.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001635 Genomic DNA. Translation: ACS19650.1 .
    RefSeqi YP_002944916.1. NC_012791.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 543728.Vapar_3031.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACS19650 ; ACS19650 ; Vapar_3031 .
    GeneIDi 7973751.
    KEGGi vap:Vapar_3031.
    PATRICi 24006471. VBIVarPar36677_3024.

    Phylogenomic databases

    eggNOGi COG4451.
    HOGENOMi HOG000141331.
    KOi K01602.
    OMAi MFDLKDA.
    OrthoDBi EOG6RC3Q7.

    Enzyme and pathway databases

    BioCyci VPAR543728:GHLL-3060-MONOMER.

    Family and domain databases

    Gene3Di 3.30.190.10. 1 hit.
    InterProi IPR000894. RuBisCO_sc_dom.
    [Graphical view ]
    Pfami PF00101. RuBisCO_small. 1 hit.
    [Graphical view ]
    SMARTi SM00961. RuBisCO_small. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55239. SSF55239. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
      Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
      J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S110Imported.

    Entry informationi

    Entry nameiC5CPR1_VARPS
    AccessioniPrimary (citable) accession number: C5CPR1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3