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C5CPR1

- C5CPR1_VARPS

UniProt

C5CPR1 - C5CPR1_VARPS

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Protein
Submitted name: Ribulose-bisphosphate carboxylase
Gene
Vapar_3031
Organism
Variovorax paradoxus (strain S110)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciVPAR543728:GHLL-3060-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Vapar_3031Imported
OrganismiVariovorax paradoxus (strain S110)Imported
Taxonomic identifieri543728 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
ProteomesiUP000000453: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi543728.Vapar_3031.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4451.
HOGENOMiHOG000141331.
KOiK01602.
OMAiMFDLKDA.
OrthoDBiEOG6RC3Q7.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

C5CPR1-1 [UniParc]FASTAAdd to Basket

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MRITQGTFSF LPDLSDEQIS RQVEYCLGKG WAIGLEYTDD PHPRNTFWEM    50
FGNPMFDIKD AAGVMLELAA CRKTFPQQYI RVTAFDSTHG TESVVMSFIV 100
NRPSNEPGFR LIRTEEPGRT IRYSLESYAV QARPEGSRY 139
Length:139
Mass (Da):15,940
Last modified:July 28, 2009 - v1
Checksum:iAA0825143E594DFF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001635 Genomic DNA. Translation: ACS19650.1.
RefSeqiYP_002944916.1. NC_012791.1.

Genome annotation databases

EnsemblBacteriaiACS19650; ACS19650; Vapar_3031.
GeneIDi7973751.
KEGGivap:Vapar_3031.
PATRICi24006471. VBIVarPar36677_3024.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001635 Genomic DNA. Translation: ACS19650.1 .
RefSeqi YP_002944916.1. NC_012791.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 543728.Vapar_3031.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACS19650 ; ACS19650 ; Vapar_3031 .
GeneIDi 7973751.
KEGGi vap:Vapar_3031.
PATRICi 24006471. VBIVarPar36677_3024.

Phylogenomic databases

eggNOGi COG4451.
HOGENOMi HOG000141331.
KOi K01602.
OMAi MFDLKDA.
OrthoDBi EOG6RC3Q7.

Enzyme and pathway databases

BioCyci VPAR543728:GHLL-3060-MONOMER.

Family and domain databases

Gene3Di 3.30.190.10. 1 hit.
InterProi IPR000894. RuBisCO_sc_dom.
[Graphical view ]
Pfami PF00101. RuBisCO_small. 1 hit.
[Graphical view ]
SMARTi SM00961. RuBisCO_small. 1 hit.
[Graphical view ]
SUPFAMi SSF55239. SSF55239. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
    Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
    J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S110.

Entry informationi

Entry nameiC5CPR1_VARPS
AccessioniPrimary (citable) accession number: C5CPR1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 14, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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