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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Vapar_3031

Organism
Variovorax paradoxus (strain S110)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciVPAR543728:GHLL-3016-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Vapar_3031Imported
OrganismiVariovorax paradoxus (strain S110)Imported
Taxonomic identifieri543728 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax
Proteomesi
  • UP000000453 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi543728.Vapar_3031.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 103RuBisCO_smallInterPro annotationAdd BLAST100

Phylogenomic databases

eggNOGiENOG4108VFZ. Bacteria.
COG4451. LUCA.
HOGENOMiHOG000141331.
KOiK01602.
OMAiWEMWGNP.
OrthoDBiPOG091H13LH.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

C5CPR1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRITQGTFSF LPDLSDEQIS RQVEYCLGKG WAIGLEYTDD PHPRNTFWEM
60 70 80 90 100
FGNPMFDIKD AAGVMLELAA CRKTFPQQYI RVTAFDSTHG TESVVMSFIV
110 120 130
NRPSNEPGFR LIRTEEPGRT IRYSLESYAV QARPEGSRY
Length:139
Mass (Da):15,940
Last modified:July 28, 2009 - v1
Checksum:iAA0825143E594DFF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001635 Genomic DNA. Translation: ACS19650.1.
RefSeqiWP_012748131.1. NC_012791.1.

Genome annotation databases

EnsemblBacteriaiACS19650; ACS19650; Vapar_3031.
KEGGivap:Vapar_3031.
PATRICi24006471. VBIVarPar36677_3024.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001635 Genomic DNA. Translation: ACS19650.1.
RefSeqiWP_012748131.1. NC_012791.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi543728.Vapar_3031.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACS19650; ACS19650; Vapar_3031.
KEGGivap:Vapar_3031.
PATRICi24006471. VBIVarPar36677_3024.

Phylogenomic databases

eggNOGiENOG4108VFZ. Bacteria.
COG4451. LUCA.
HOGENOMiHOG000141331.
KOiK01602.
OMAiWEMWGNP.
OrthoDBiPOG091H13LH.

Enzyme and pathway databases

BioCyciVPAR543728:GHLL-3016-MONOMER.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiC5CPR1_VARPS
AccessioniPrimary (citable) accession number: C5CPR1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: November 2, 2016
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.