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C5CNM5 (C5CNM5_VARPS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Vapar_0990 EMBL ACS17641.1
OrganismVariovorax paradoxus (strain S110) [Complete proteome] [HAMAP] EMBL ACS17641.1
Taxonomic identifier543728 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax

Protein attributes

Sequence length227 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionTransferase EMBL ACS17641.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functiontransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5CNM5 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 1CA3E4F9B9203630

FASTA22725,215
        10         20         30         40         50         60 
MRKLYIGNKN YSSWSMRPWV LMKQADIPFE EVKVRFDSFA PDSHFKKTMG AINPVAEVPA 

        70         80         90        100        110        120 
LVDGDLVVWD TLAIAEYLAE TFPEKQLWPR AAAERARARS ICAEMHAGFG KLRSLCPMNI 

       130        140        150        160        170        180 
EASLAEVGAR LLKDNPALQA DLDRIVQMWS GLLEAHGGPL LFGGFSIADS YFAPVGTRIK 

       190        200        210        220 
TYGLPVPPAI SAYIERVQAL PGVKAWIDDA LAEKDFVAFN EPYRTAR 

« Hide

References

[1]"Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S110.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001635 Genomic DNA. Translation: ACS17641.1.
RefSeqYP_002942907.1. NC_012791.1.

3D structure databases

ProteinModelPortalC5CNM5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING543728.Vapar_0990.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS17641; ACS17641; Vapar_0990.
GeneID7971961.
KEGGvap:Vapar_0990.
PATRIC24002384. VBIVarPar36677_1001.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0625.
HOGENOMHOG000147851.
KOK04097.
OMARSACAQM.
OrthoDBEOG66MQMW.
ProtClustDBCLSK951130.

Enzyme and pathway databases

BioCycVPAR543728:GHLL-997-MONOMER.

Family and domain databases

Gene3D1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamPF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5CNM5_VARPS
AccessionPrimary (citable) accession number: C5CNM5
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: April 16, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)