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C5CL88 (C5CL88_VARPS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.5.1.18 EMBL ACS21239.1
Gene names
Ordered Locus Names:Vapar_4634 EMBL ACS21239.1
OrganismVariovorax paradoxus (strain S110) [Complete proteome] [HAMAP] EMBL ACS21239.1
Taxonomic identifier543728 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax

Protein attributes

Sequence length224 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the GST superfamily. RuleBase RU003494

Ontologies

Keywords
   Molecular functionTransferase EMBL ACS21239.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionglutathione transferase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5CL88 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 15613BC328346D5B

FASTA22424,744
        10         20         30         40         50         60 
MLTVHHLNNS RSQRVLWLLE ELGLPYEIVH YQRDPQTMLA PASLRAVHPL GKSPVVTTDD 

        70         80         90        100        110        120 
GLALAESGAV IETLIERHGS GRLAPAAGTP EAVRYRYWLH FAEGSAMSPL LLKLVFDRIE 

       130        140        150        160        170        180 
NSKMPFFVKP IAKMISGKAK AAIVTPNIES HLNFMEGELG KSEWFAGSEF TGADIQMSFP 

       190        200        210        220 
VEAAQARGGL DAKRPRLMAY LERIHARPAY QRALERGGPY GLLS 

« Hide

References

[1]"Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110."
Han J.I., Choi H.K., Lee S.W., Orwin P.M., Kim J., Laroe S.L., Kim T.G., O'Neil J., Leadbetter J.R., Lee S.Y., Hur C.G., Spain J.C., Ovchinnikova G., Goodwin L., Han C.
J. Bacteriol. 193:1183-1190(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S110.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001635 Genomic DNA. Translation: ACS21239.1.
RefSeqYP_002946505.1. NC_012791.1.

3D structure databases

ProteinModelPortalC5CL88.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING543728.Vapar_4634.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS21239; ACS21239; Vapar_4634.
GeneID7972844.
KEGGvap:Vapar_4634.
PATRIC24009699. VBIVarPar36677_4624.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0625.
HOGENOMHOG000125753.
KOK00799.
OMARYWLHYA.
OrthoDBEOG6W721N.

Enzyme and pathway databases

BioCycVPAR543728:GHLL-4678-MONOMER.

Family and domain databases

Gene3D1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR004046. GST_C.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamPF00043. GST_C. 1 hit.
PF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5CL88_VARPS
AccessionPrimary (citable) accession number: C5CL88
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: April 16, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)