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Protein

Glycogen synthase

Gene

glgA

Organism
Kosmotoga olearia (strain TBF 19.5.1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciKOLE521045:GHRV-1973-MONOMER.
UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:Kole_1922
OrganismiKosmotoga olearia (strain TBF 19.5.1)
Taxonomic identifieri521045 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeKosmotoga
ProteomesiUP000002382 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 475475Glycogen synthasePRO_1000206431Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi521045.Kole_1922.

Structurei

3D structure databases

ProteinModelPortaliC5CGT4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

C5CGT4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKILFVSYEV YPLAKVGGLA DVAGSLPKYL EKEGVSVQIA MPFHKKVKAD
60 70 80 90 100
NIENTGIVIT TKHLPEKYSF EIYKTPLPGS GVPVFLFKND QLIDSDEVYE
110 120 130 140 150
GTDLALQAIA FSDAVVKFAE TLEPDLLHVN DWQPALIPAY ISAFYNGKPK
160 170 180 190 200
TLLTIHNLGY QGEFDKSYFY KTGLPEKLWQ EGKAVKNGAF NFLKTGIVTA
210 220 230 240 250
TAISTVSPTY AKEIQTPEYG AGLDETLRAL SDRLFGILNG IDYSEYNPAT
260 270 280 290 300
DKRIPVNFDI NSLEKKKENK IALQKELGLP VIDVPVIGLI SRLVEQKGFD
310 320 330 340 350
LIEAAAEKIL SNDLQFVVLG TGEERYERLF KSLGERFPEK VSANITFNVD
360 370 380 390 400
LAQKIYAGSD MFLMPSRYEP CGLGQMFAMR YGTIPVVRFT GGLRDTVKEF
410 420 430 440 450
NPETLEGNGF GFEEYNPDKL LEAVEKAIKI YENKTLWNQL MLNAMNTDCS
460 470
WDKSAREYIK LYKHVLNSGR DILNA
Length:475
Mass (Da):53,223
Last modified:July 27, 2009 - v1
Checksum:i0865E4C829635863
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001634 Genomic DNA. Translation: ACR80603.1.
RefSeqiYP_002941607.1. NC_012785.1.

Genome annotation databases

EnsemblBacteriaiACR80603; ACR80603; Kole_1922.
KEGGikol:Kole_1922.
PATRICi22189206. VBIKosOle109242_2013.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001634 Genomic DNA. Translation: ACR80603.1.
RefSeqiYP_002941607.1. NC_012785.1.

3D structure databases

ProteinModelPortaliC5CGT4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi521045.Kole_1922.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACR80603; ACR80603; Kole_1922.
KEGGikol:Kole_1922.
PATRICi22189206. VBIKosOle109242_2013.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciKOLE521045:GHRV-1973-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Thermotogales bacterium TBF 19.5.1."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Noll K.
    Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TBF 19.5.1.

Entry informationi

Entry nameiGLGA_KOSOT
AccessioniPrimary (citable) accession number: C5CGT4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 21, 2009
Last sequence update: July 27, 2009
Last modified: March 31, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.