C5CGQ5 (RS17_KOSOT) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S17

Gene names

Name:	rpsQ
Ordered Locus Names:	Kole_1893

Organism

Kosmotoga olearia (strain TBF 19.5.1) [Complete proteome] [HAMAP]

Taxonomic identifier

521045 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Thermotogae › Thermotogae › Thermotogales › Thermotogaceae › Kosmotoga › Kosmotoga olearia

Protein attributes

Sequence length	101 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA By similarity. HAMAP-Rule MF_01345
Subunit structure	Part of the 30S ribosomal subunit By similarity. HAMAP-Rule MF_01345
Sequence similarities	Belongs to the ribosomal protein S17P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 101	101	30S ribosomal protein S17 HAMAP-Rule MF_01345		PRO_1000214789

Sequences

	Sequence		Length	Mass (Da)
	C5CGQ5 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 2440B0B94BBCE7AB	FASTA	101	11,571
	10 20 30 40 50 60 MPRKKLVGTV VSNKMDKTVV VRVERTFAHP LYKKTVKRAK KYHAHDEDNS CGIGDIVEIE 70 80 90 100 ECRPLSKTKK FKVVRIVKKS VFGEEKLETP ENVEMLGGEE K

References

[1]

"Complete sequence of Thermotogales bacterium TBF 19.5.1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Noll K. Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TBF 19.5.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001634 Genomic DNA. Translation: ACR80574.1.
RefSeq	YP_002941578.1. NC_012785.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	521045.Kole_1893.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACR80574; ACR80574; Kole_1893.
GeneID	7967815.
KEGG	kol:Kole_1893.
PATRIC	22189148. VBIKosOle109242_1984.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0186.
HOGENOM	HOG000231339.
KO	K02961.
Enzyme and pathway databases
BioCyc	KOLE521045:GHRV-1944-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
HAMAP	MF_01345_B. Ribosomal_S17_B.
InterPro	IPR012340. NA-bd_OB-fold. IPR000266. Ribosomal_S17. IPR019984. Ribosomal_S17_bac-type. IPR019979. Ribosomal_S17_CS. [Graphical view]
PANTHER	PTHR10744. PTHR10744. 1 hit.
Pfam	PF00366. Ribosomal_S17. 1 hit. [Graphical view]
PRINTS	PR00973. RIBOSOMALS17.
ProDom	PD001295. Ribosomal_S17. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR03635. S17_bact. 1 hit.
PROSITE	PS00056. RIBOSOMAL_S17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS17_KOSOT

Accession

Primary (citable) accession number: C5CGQ5

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 22, 2009
Last sequence update:	July 28, 2009
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program