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Protein
Submitted name:

Ribosomal RNA small subunit methyltransferase RsmB

Gene

Mlut_10810

Organism
Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) (Micrococcus lysodeikticus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationImported, Transferase

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal RNA small subunit methyltransferase RsmBImported
Gene namesi
Ordered Locus Names:Mlut_10810Imported
OrganismiMicrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) (Micrococcus lysodeikticus)Imported
Taxonomic identifieri465515 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrococcaceaeMicrococcus
Proteomesi
  • UP000000738 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi465515.MlutN2_010100001759.

Structurei

3D structure databases

ProteinModelPortaliC5CBJ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini233 – 541SAM_MT_RSMB_NOPInterPro annotationAdd BLAST309

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

eggNOGiENOG410892Z. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037302.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5CBJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSREGQPGQG RGERGTRGER GRAPRPDAQD RRDAQGRTRN RGRSGAARKY
60 70 80 90 100
SAQAPSQRSR TADPARRVAF GVVRSVHAED AYANLVLPAR IRQARLDRRD
110 120 130 140 150
AGFATELAYG TLRGLGLYDA ILTRCVDRPL EKIDPPVLDA LRLGAHQLLG
160 170 180 190 200
MRVPAHAALD ATVSLVRAEV GAGASGFVNA VLRRIAERPL EEWLADVAPA
210 220 230 240 250
DGGDAALAVR TSHPVWIVRA LRQALAAHRG TRHIADRDAE LAALLEANNA
260 270 280 290 300
PPVVNLVALP VAGGAEALAA ALDDGAEPGP LAPDSALHSG GDAGRLPGVR
310 320 330 340 350
EGVLRVQDAG SQLTARALAH VPVPAAEGRA ERWLDLCAGP GGKAALLAAL
360 370 380 390 400
AAERGATLVA NEVAPHRADL VRQALAAVPA GAWTVRAGDG RTIADAPEAA
410 420 430 440 450
PAFDRVLVDA PCTGLGALRR RPESRWRRTP ADLAELTGLQ AELLDAAVAV
460 470 480 490 500
LAPGGVLAYV TCSPHVAETV VQVQDLVRRH PELELLDART ALDAVALDDL
510 520 530 540
RLDEAEPAGA PEPADVVART AQLWPHRHGT DAMFLALLRA PGA
Length:543
Mass (Da):56,950
Last modified:July 28, 2009 - v1
Checksum:i67FAA9F2EA28AC4C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001628 Genomic DNA. Translation: ACS30589.1.
RefSeqiWP_012750864.1. NC_012803.1.

Genome annotation databases

EnsemblBacteriaiACS30589; ACS30589; Mlut_10810.
GeneIDi7985744.
KEGGimlu:Mlut_10810.
PATRICi22622796. VBIMicLut29563_1025.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001628 Genomic DNA. Translation: ACS30589.1.
RefSeqiWP_012750864.1. NC_012803.1.

3D structure databases

ProteinModelPortaliC5CBJ2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi465515.MlutN2_010100001759.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACS30589; ACS30589; Mlut_10810.
GeneIDi7985744.
KEGGimlu:Mlut_10810.
PATRICi22622796. VBIMicLut29563_1025.

Phylogenomic databases

eggNOGiENOG410892Z. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037302.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiC5CBJ2_MICLC
AccessioniPrimary (citable) accession number: C5CBJ2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: November 30, 2016
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.