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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Bcav_0664

Organism
Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciBCAV471853:GI1Z-673-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Bcav_0664Imported
OrganismiBeutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432)Imported
Taxonomic identifieri471853 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesBeutenbergiaceaeBeutenbergia
ProteomesiUP000007962 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi471853.Bcav_0664.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
OMAiPDEWRID.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

C5BY32-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAREASDAVE LEIADKVVRL THPDRVYFPE HGYTKRDLAE YYVAVGDGIV
60 70 80 90 100
RALRERPCML HRFPKGIAEK KVHQKRVPAG APPWVRTVRV EFPRYGRHAY
110 120 130 140 150
ELCVTEPAQV IWAVQMSTVE FHPWNSRAAD TEKPDEWRID LDPGPDCPFS
160 170 180 190 200
RVQRVAGVVH EVLDELGAVG WPKTSGGSGL HIYVRIEPRY GFKDVRRAAL
210 220 230 240 250
AFAREIERRA PDDVTTTWWT RDRDPALLFV DYNQNARDHT IAAAYSVRGV
260 270 280 290 300
PDARVSAPIT WAEVPDVDPH DFTIGTMPDR FEALGDLHAG IDDAVFSIEP
310 320 330
LLEWAERDER AGADAGGPTD EADDADESDQ EEHA
Length:334
Mass (Da):37,625
Last modified:July 28, 2009 - v1
Checksum:i933AFF5415D7CD69
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001618 Genomic DNA. Translation: ACQ78926.1.

Genome annotation databases

EnsemblBacteriaiACQ78926; ACQ78926; Bcav_0664.
KEGGibcv:Bcav_0664.
PATRICi21091889. VBIBeuCav91323_0676.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001618 Genomic DNA. Translation: ACQ78926.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi471853.Bcav_0664.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACQ78926; ACQ78926; Bcav_0664.
KEGGibcv:Bcav_0664.
PATRICi21091889. VBIBeuCav91323_0676.

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
OMAiPDEWRID.
OrthoDBiEOG6FV833.

Enzyme and pathway databases

BioCyciBCAV471853:GI1Z-673-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-8 / DSM 12333 / NBRC 16432Imported.

Entry informationi

Entry nameiC5BY32_BEUC1
AccessioniPrimary (citable) accession number: C5BY32
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: July 22, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.