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C5BY21 (C5BY21_BEUC1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Bcav_0653 EMBL ACQ78915.1
OrganismBeutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) [Complete proteome] [HAMAP] EMBL ACQ78915.1
Taxonomic identifier471853 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeBeutenbergiaceaeBeutenbergia

Protein attributes

Sequence length816 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5BY21 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: E544CDD9BA9970E9

FASTA81688,722
        10         20         30         40         50         60 
MAAGDGGARV RVDGRVLSLT NLDKVLFPAT GTTKAELIDY YRRIAPVMIP HLAGRAVTRK 

        70         80         90        100        110        120 
RWPNGVETEP FFTKNLDSGT PDWVPRRGIV HHERTSTYPL VEDTATLVWL AQMASIELHV 

       130        140        150        160        170        180 
PQWRFPPGDS PFVLDGSATR PDRFVLDLDP GPGVGLAQCA EVALAAKGYL DDVGLAAIPV 

       190        200        210        220        230        240 
TSGSKGLHLY ATIHGVSSEQ ASAFAKELAG HLAEDLPQLV VTQMKRSLRD GKVFVDYSQN 

       250        260        270        280        290        300 
NAAKTTVSPY SVRGRDQPWV AAPRTWGELG EPGLAHLELG EVLERAADGD LLAPLLPPDP 

       310        320        330        340        350        360 
LSTYRAKRDS ARTPEPVPFA APVAAPAGDP RFVIQEHHAR RLHWDLRLEH DGVLASWAVP 

       370        380        390        400        410        420 
RGVPTTTGHN RLAVHTEDHP MEYLTFHGSI PKGEYGGGEM TVWDTGTYTP EKFRDDEVIF 

       430        440        450        460        470        480 
VLHGQRVQGR FALIRTDPGR GGGKEQWLLH LMKDQSGVAT SPEKRAHAVV DAPDAAADDG 

       490        500        510        520        530        540 
AHISLSDAVE PRRIAPDLRP MLATAGQVGD GDYPAREWAF EPKWDGYRAL VRFSARGVAL 

       550        560        570        580        590        600 
QSRSGRDFTQ EFAELAVVPE ELAAHAGVLD AEIVALDAAG RPSFHALQER GTGARPAMRL 

       610        620        630        640        650        660 
LVFDVLHLDG TSLVNKRYSD RRQVLLALPL PAADPDHLGR EERDVGGWRR SVTIGTSVRA 

       670        680        690        700        710        720 
ALRASAEARL EGVIAKRLDA RYLPGRRGHA WVKLKHSLDA EVVIGGWRPG QGRRAGGIGS 

       730        740        750        760        770        780 
LLLGVPDDDG GLRYVGKVGT GFTDAALDAL LATLEPRERT TSPFTTEVPR VEAKVAHWVR 

       790        800        810 
PDVVGEVTFD SWTDDGVLRA ARWRGLRPDK APADLA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001618 Genomic DNA. Translation: ACQ78915.1.
RefSeqYP_002880677.1. NC_012669.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING471853.Bcav_0653.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACQ78915; ACQ78915; Bcav_0653.
GeneID7858454.
KEGGbcv:Bcav_0653.
PATRIC21091867. VBIBeuCav91323_0665.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMASKGIHLY.
OrthoDBEOG661H49.
ProtClustDBPRK09632.

Enzyme and pathway databases

BioCycBCAV471853:GI1Z-662-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5BY21_BEUC1
AccessionPrimary (citable) accession number: C5BY21
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: April 16, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)