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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Bcav_0480

Organism
Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBCAV471853:GI1Z-486-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Bcav_0480Imported
OrganismiBeutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432)Imported
Taxonomic identifieri471853 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeBeutenbergiaceaeBeutenbergia
ProteomesiUP000007962: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi471853.Bcav_0480.

Structurei

3D structure databases

ProteinModelPortaliC5BX68.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5BX68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALPLTSPID PMLAKSVRGV PDADAVPGGY AYEPKWDGFR TIVFADDGDV
60 70 80 90 100
ELQSRNGKPM TRYFPEIVDA VKAELPARCV VDGEVVLSRG GRLDFELLGQ
110 120 130 140 150
RIHPAASRVK MLAEHAPAAL VVFDLLALGD DDLTQRPFAE RAAALDELGL
160 170 180 190 200
DGPSVHVTPR TRDADVAREW FTTYEGAGLD GVVAKPLDGA YEPGKRAMLK
210 220 230 240 250
IKHERTADVA LAGYRLHKTS TDERPLIGSL LLGLFDDGGD LRFVGVSASF
260 270 280 290 300
PAARRAELYD ELQELRVGEG DEHPWGNWQQ PEGSRRPGAV SRWNAGKDLS
310 320 330 340 350
FTALRVERVL EVGYDHMEGD RFRHTAQFKR WRPDREPTSC TYAQLDEAVG
360 370
YDLAELLPGA PTAAPGFTGA L
Length:371
Mass (Da):40,602
Last modified:July 28, 2009 - v1
Checksum:i9B116BAD9E8B77D8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001618 Genomic DNA. Translation: ACQ78743.1.
RefSeqiYP_002880505.1. NC_012669.1.

Genome annotation databases

EnsemblBacteriaiACQ78743; ACQ78743; Bcav_0480.
GeneIDi7861864.
KEGGibcv:Bcav_0480.
PATRICi21091508. VBIBeuCav91323_0489.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001618 Genomic DNA. Translation: ACQ78743.1.
RefSeqiYP_002880505.1. NC_012669.1.

3D structure databases

ProteinModelPortaliC5BX68.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi471853.Bcav_0480.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACQ78743; ACQ78743; Bcav_0480.
GeneIDi7861864.
KEGGibcv:Bcav_0480.
PATRICi21091508. VBIBeuCav91323_0489.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Enzyme and pathway databases

BioCyciBCAV471853:GI1Z-486-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-8 / DSM 12333 / NBRC 16432Imported.

Entry informationi

Entry nameiC5BX68_BEUC1
AccessioniPrimary (citable) accession number: C5BX68
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: March 4, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.