C5BPP6 (C5BPP6_TERTT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL ACR10775.1
EC=5.1.1.1 EMBL ACR10775.1

Gene names

Ordered Locus Names:

TERTU_0865

Organism

Teredinibacter turnerae (strain ATCC 39867 / T7901) [Complete proteome] [HAMAP] EMBL ACR10775.1

Taxonomic identifier

377629 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadales genera incertae sedis › Teredinibacter › Teredinibacter turnerae

Protein attributes

Sequence length	382 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL ACR10775.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5BPP6 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 3A459C0343441920	FASTA	382	40,969
	10 20 30 40 50 60 MTHTLTINLS KIAANWQALN RFVSAPVDCG AVVKADAYSL GMAEVLPALY LAGCRTFYVA 70 80 90 100 110 120 NLGEALDARG ILSDVCGSYS DVAIVVLGGC APGEERRFID YRLVPVLVST AMLERWCTVN 130 140 150 160 170 180 GGEHNVLGSI LKLNTGMGRL GLEPAEFERV VQDPAYLARA DVRMLMSHLA CADEPEHSLN 190 200 210 220 230 240 AEQLQRFRRA LDVSSERYRP LTASLANSAG VCLGGDYHFN AVRPGLGLYT SFAQADACGL 250 260 270 280 290 300 GLETAVELHL PVVQVRNLPA GESVGYGATY RAERDARLAV VAGGYADGLF RALSNRAHCW 310 320 330 340 350 360 VCAPSGAGGW RVPVVGRISM DTTIVDISAV PEGVVAEGSR IEFIGEHVPL DDLAASAQTI 370 380 NYEILTSLGV RYKRHYIRAN PS

References

[1]

"The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms)." Yang J.C., Madupu R., Durkin A.S., Ekborg N.A., Pedamallu C.S., Hostetler J.B., Radune D., Toms B.S., Henrissat B., Coutinho P.M., Schwarz S., Field L., Trindade-Silva A.E., Soares C.A.G., Elshahawi S., Hanora A., Schmidt E.W., Haygood M.G. , Posfai J., Benner J., Madinger C., Nove J., Anton B., Chaudhary K., Foster J., Holman A., Kumar S., Lessard P.A., Luyten Y.A., Slatko B., Wood N., Wu B., Teplitski M., Mougous J.D., Ward N., Eisen J.A., Badger J.H., Distel D.L. PLoS ONE 4:E6085-E6085(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39867 / T7901.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001614 Genomic DNA. Translation: ACR10775.1.
RefSeq	YP_003072474.1. NC_012997.1.
3D structure databases
ProteinModelPortal	C5BPP6.
ModBase	Search...
Protein-protein interaction databases
STRING	377629.TERTU_0865.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACR10775; ACR10775; TERTU_0865.
GeneID	8212118.
KEGG	ttu:TERTU_0865.
PATRIC	23868919. VBITerTur118718_0817.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031445.
KO	K01775.
OMA	CATAFAN.
ProtClustDB	CLSK2528484.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C5BPP6_TERTT

Accession

Primary (citable) accession number: C5BPP6

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	May 1, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)