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C5BP32 (C5BP32_TERTT) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
D-alanine--D-alanine ligase HAMAP-Rule MF_00047
EC=6.3.2.4 HAMAP-Rule MF_00047
Alternative name(s):
D-Ala-D-Ala ligase HAMAP-Rule MF_00047
D-alanylalanine synthetase HAMAP-Rule MF_00047
Gene names
Name:ddl HAMAP-Rule MF_00047
Ordered Locus Names:TERTU_3047
OrganismTeredinibacter turnerae (strain ATCC 39867 / T7901) [Complete proteome] [HAMAP] EMBL ACR13091.1
Taxonomic identifier377629 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadales genera incertae sedis › Teredinibacter ›

Protein attributes

Sequence length317 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Cell wall formation By similarity. HAMAP-Rule MF_00047 SAAS SAAS000291

Catalytic activity

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine. HAMAP-Rule MF_00047 SAAS SAAS000291

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity. HAMAP-Rule MF_00047 SAAS SAAS000291

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP-Rule MF_00047 SAAS SAAS000291

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00047 SAAS SAAS000291.

Sequence similarities

Belongs to the D-alanine--D-alanine ligase family. HAMAP-Rule MF_00047

Contains 1 ATP-grasp domain. HAMAP-Rule MF_00047 SAAS SAAS000291

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain115 – 310196ATP-grasp By similarity HAMAP-Rule MF_00047
Nucleotide binding141 – 19656ATP By similarity HAMAP-Rule MF_00047

Sites

Metal binding2641Magnesium or manganese 1 By similarity HAMAP-Rule MF_00047
Metal binding2771Magnesium or manganese 1 By similarity HAMAP-Rule MF_00047
Metal binding2771Magnesium or manganese 2 By similarity HAMAP-Rule MF_00047
Metal binding2791Magnesium or manganese 2 By similarity HAMAP-Rule MF_00047

Sequences

Sequence LengthMass (Da)Tools
C5BP32 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 0AF4A9B3AC311D46

FASTA31734,123
        10         20         30         40         50         60 
MYQPGFKNFV NSGKSFGKVA VLYGGTSAER DVSLKSGRAV ANGLREQGID ILELDIGNQG 

        70         80         90        100        110        120 
VAQILAATFD RAFIALHGEG GEDGKVQALL QLLGIPFTGS LHTASAIAMD KLKTKQIWLS 

       130        140        150        160        170        180 
ASLPTPDYRV LQSSDDFAAC LQALGGSVFV KPVHEGSSIG MTCANNKEEL KAAFEAAEKF 

       190        200        210        220        230        240 
DSEVFAESTV VGREFTVAIL GETVLPPIEL LPSNRFYDYD AKYISNETRY LCPCNLTPDK 

       250        260        270        280        290        300 
NKELCELALK SFKMIGCSGW GRVDALQDEA GNFHLLEVNT VPGMTDHSLV PMAARAVGLN 

       310 
FSELVAEILY ISTLGAR

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001614 Genomic DNA. Translation: ACR13091.1.
RefSeqYP_003074424.1. NC_012997.1.

3D structure databases

ProteinModelPortalC5BP32.
ModBaseSearch...

Protein-protein interaction databases

STRING377629.TERTU_3047.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACR13091; ACR13091; TERTU_3047.
GeneID8213205.
KEGGttu:TERTU_3047.
PATRIC23873009. VBITerTur118718_2831.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1181.
HOGENOMHOG000011592.
KOK01921.
OMAGCRTWGR.

Enzyme and pathway databases

BioCycTTUR377629:GHSU-2763-MONOMER.
UniPathwayUPA00219.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
3.40.50.20. 1 hit.
HAMAPMF_00047. Dala_Dala_lig.
InterProIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR000291. D-Ala_lig_Van_CS.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR011127. Dala_Dala_lig_N.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 1 hit.
PF01820. Dala_Dala_lig_N. 2 hits.
[Graphical view]
SUPFAMSSF52440. PreATP-grasp-like. 1 hit.
TIGRFAMsTIGR01205. D_ala_D_alaTIGR. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
PS00843. DALA_DALA_LIGASE_1. 1 hit.
PS00844. DALA_DALA_LIGASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5BP32_TERTT
AccessionPrimary (citable) accession number: C5BP32
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 29, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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