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C5BNG6 (SYR_TERTT) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Arginine--tRNA ligase

EC=6.1.1.19
Alternative name(s):
Arginyl-tRNA synthetase
Short name=ArgRS
Gene names
Name:argS
Ordered Locus Names:TERTU_2959
OrganismTeredinibacter turnerae (strain ATCC 39867 / T7901) [Complete proteome] [HAMAP]
Taxonomic identifier377629 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadales genera incertae sedisTeredinibacter

Protein attributes

Sequence length578 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg). HAMAP-Rule MF_00123

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00123

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00123.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   LigandATP-binding
Nucleotide-binding
   Molecular functionAminoacyl-tRNA synthetase
Ligase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processarginyl-tRNA aminoacylation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

arginine-tRNA ligase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 578578Arginine--tRNA ligase HAMAP-Rule MF_00123
PRO_1000203107

Regions

Motif123 – 13311"HIGH" region HAMAP-Rule MF_00123

Sequences

Sequence LengthMass (Da)Tools
C5BNG6 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 9421CC07B9AFA40B

FASTA57863,748
        10         20         30         40         50         60 
MNIRKFLADR VRSAMSDVGI PNDYSPHLAI SKKPGFGDYQ ANGAMAAAKA MKTNPRELAQ 

        70         80         90        100        110        120 
SIVDSLDLSG VAEKVEIAGP GFINIHLENA WLARQLAESS STANLAAQTE QEAQTVVVDY 

       130        140        150        160        170        180 
SSPNLAKEMH VGHLRSTIIG DCLARILEFN GDKVIRQNHV GDWGTQFGML IAELETQLSD 

       190        200        210        220        230        240 
GDKPDFALKD LESFYQKAKA HFDTDAAFAT KARDYVVRLQ SGDQHILNLW ESFKRVSLKH 

       250        260        270        280        290        300 
SEEIYSLLNV TLGPQDVRGE SAYNDDLAAV VSELKAQGLA VEDDGAQVVF LQELADKNGD 

       310        320        330        340        350        360 
PSPVIVQKKD GGYLYSTTDL AALRYRTGEL AADRILYFID ARQSLHMQQV FTVARKANFV 

       370        380        390        400        410        420 
NEWVSLEHHP FGTMMGADGK PFKTRSGGTV KLAELLEEAV ERASQVVAAN SELDAQEAAD 

       430        440        450        460        470        480 
IARKVGIGAI KYADLSKTRT NDYVFNWDAM LSFEGNTGPY LQYAYTRIKS IFRKADLDLE 

       490        500        510        520        530        540 
SFAADLNIYE AQEKALALKT LQFAEVVEQV ASEALPHVLC NYLYDLSSLF MTFYEACPIL 

       550        560        570 
KSDVPEDTRN SRLVLSASVA KTLALGLDLL GIEVMERM 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001614 Genomic DNA. Translation: ACR14530.1.
RefSeqYP_003074341.1. NC_012997.1.

3D structure databases

ProteinModelPortalC5BNG6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING377629.TERTU_2959.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACR14530; ACR14530; TERTU_2959.
GeneID8212378.
KEGGttu:TERTU_2959.
PATRIC23872841. VBITerTur118718_2748.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0018.
HOGENOMHOG000247212.
KOK01887.
OMAMEHMGFG.
OrthoDBEOG6JB13C.

Enzyme and pathway databases

BioCycTTUR377629:GHSU-2678-MONOMER.

Family and domain databases

Gene3D1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPMF_00123. Arg_tRNA_synth.
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERPTHR11956. PTHR11956. 1 hit.
PfamPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSPR01038. TRNASYNTHARG.
SMARTSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsTIGR00456. argS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSYR_TERTT
AccessionPrimary (citable) accession number: C5BNG6
Entry history
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: July 28, 2009
Last modified: May 14, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Aminoacyl-tRNA synthetases

List of aminoacyl-tRNA synthetase entries