C5BIT1 (C5BIT1_TERTT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Xanthine dehydrogenase, small subunit EMBL ACR12309.1
EC=1.17.1.4 EMBL ACR12309.1

Gene names

Name:	xdhA EMBL ACR12309.1
Ordered Locus Names:	TERTU_2067

Organism

Teredinibacter turnerae (strain ATCC 39867 / T7901) [Complete proteome] [HAMAP] EMBL ACR12309.1

Taxonomic identifier

377629 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadales genera incertae sedis › Teredinibacter › Teredinibacter turnerae

Protein attributes

Sequence length	484 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 2Fe-2S ferredoxin-type domain. RuleBase RU000392

Ontologies

Keywords
Ligand	2Fe-2S RuleBase RU000392 Iron Iron-sulfur Metal-binding
Molecular function	Oxidoreductase EMBL ACR12309.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	2 iron, 2 sulfur cluster binding Inferred from electronic annotation. Source: UniProtKB-KW UDP-N-acetylmuramate dehydrogenase activity Inferred from electronic annotation. Source: InterPro electron carrier activity Inferred from electronic annotation. Source: InterPro flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW xanthine dehydrogenase activity Inferred from electronic annotation. Source: EC xanthine oxidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5BIT1 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 8A766FBDE933AE28	FASTA	484	52,928
	10 20 30 40 50 60 MKFVLNQELV TVELEDASTT VLSYLRTQKR SVGTKEGCAS GDCGACTCLV GELEKDTVNY 70 80 90 100 110 120 HTINSCITPL GAIAGKHLVT VEHLAQEQIH PVQAAMVKYH GSQCGFCTPG FVMSLTAFHN 130 140 150 160 170 180 ALFTNADITH QQPTREDVSS AVAGNLCRCT GYRPILDAGM AACQSPAPQL HNSEVRHWLE 190 200 210 220 230 240 NLDALDDTPY YAPQTLAEWS ELKSAFPAAR AIAGGTDLML EVTQHYRDIP QLIDVTQIRE 250 260 270 280 290 300 LRVFDLTDKK LVLGAGLSYT QLAERCSSVF PALTAFMPRL ASPQIRNRGT LGGNIANASP 310 320 330 340 350 360 IADTPPILLA MDATIELNNA AYQRRTLPLD EFYLGYKQTQ LAKNELLVSV RIPVAALTHF 370 380 390 400 410 420 HRFYKVSKRY EDDISAVMGA FRFHIENGVF KEARIAYGGV AATPLRVKSA EAALIDQTMD 430 440 450 460 470 480 NENALANALQ NLADTLEPLS DVRASAGYRL TIAMNLLRKA WLEANGEHLP DLHTTAYSGE VGYA

References

[1]

"The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms)." Yang J.C., Madupu R., Durkin A.S., Ekborg N.A., Pedamallu C.S., Hostetler J.B., Radune D., Toms B.S., Henrissat B., Coutinho P.M., Schwarz S., Field L., Trindade-Silva A.E., Soares C.A.G., Elshahawi S., Hanora A., Schmidt E.W., Haygood M.G. , Posfai J., Benner J., Madinger C., Nove J., Anton B., Chaudhary K., Foster J., Holman A., Kumar S., Lessard P.A., Luyten Y.A., Slatko B., Wood N., Wu B., Teplitski M., Mougous J.D., Ward N., Eisen J.A., Badger J.H., Distel D.L. PLoS ONE 4:E6085-E6085(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39867 / T7901.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001614 Genomic DNA. Translation: ACR12309.1.
RefSeq	YP_003073537.1. NC_012997.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	377629.TERTU_2067.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACR12309; ACR12309; TERTU_2067.
GeneID	8213299.
KEGG	ttu:TERTU_2067.
PATRIC	23871177. VBITerTur118718_1922.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4630.
HOGENOM	HOG000256890.
KO	K13481.
OMA	SGDKRCL.
ProtClustDB	CLSK864203.
Enzyme and pathway databases
BioCyc	TTUR377629:GHSU-1866-MONOMER.
Family and domain databases
Gene3D	1.10.150.120. 1 hit. 3.10.20.30. 1 hit. 3.30.43.10. 1 hit. 3.30.465.10. 1 hit.
InterPro	IPR002888. 2Fe-2S-bd. IPR001041. 2Fe-2S_ferredoxin-type. IPR006058. 2Fe2S_fd_BS. IPR012675. Beta-grasp_dom. IPR005107. CO_DH_flav_C. IPR016169. CO_DH_flavot_FAD-bd_sub2. IPR016166. FAD-bd_2. IPR016167. FAD-bd_2_sub1. IPR002346. Mopterin_DH_FAD-bd. IPR012175. Xanth_DH_ssu_bac. IPR014307. Xanthine_DH_ssu. [Graphical view]
Pfam	PF03450. CO_deh_flav_C. 1 hit. PF00941. FAD_binding_5. 1 hit. PF00111. Fer2. 1 hit. PF01799. Fer2_2. 1 hit. [Graphical view]
PIRSF	PIRSF036557. XdhA_RC. 1 hit.
SMART	SM01092. CO_deh_flav_C. 1 hit. [Graphical view]
SUPFAM	SSF47741. 2Fe-2S_bind. 1 hit. SSF55447. CO_deh_flav_C. 1 hit. SSF56176. FAD-binding_2. 1 hit. SSF54292. Ferredoxin. 1 hit.
TIGRFAMs	TIGR02963. xanthine_xdhA. 1 hit.
PROSITE	PS00197. 2FE2S_FER_1. 1 hit. PS51085. 2FE2S_FER_2. 1 hit. PS51387. FAD_PCMH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5BIT1_TERTT

Accession

Primary (citable) accession number: C5BIT1

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	May 29, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)