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C5BIJ2

- C5BIJ2_TERTT

UniProt

C5BIJ2 - C5BIJ2_TERTT

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Protein
Submitted name:

Isocitrate dehydrogenase, NADP-dependent

Gene
TERTU_1960
Organism
Teredinibacter turnerae (strain ATCC 39867 / T7901)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

Cofactori

Binds 1 magnesium or manganese ion per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei147 – 1471Substrate By similarity
Sitei257 – 2571Critical for catalysis By similarityUniRule annotation
Metal bindingi352 – 3521Magnesium or manganese By similarityUniRule annotation
Sitei422 – 4221Critical for catalysis By similarityUniRule annotation
Binding sitei549 – 5491Substrate By similarityUniRule annotation
Metal bindingi550 – 5501Magnesium or manganese By similarityUniRule annotation
Metal bindingi554 – 5541Magnesium or manganese By similarityUniRule annotation

GO - Molecular functioni

  1. isocitrate dehydrogenase (NADP+) activity Source: UniProtKB-EC
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciTTUR377629:GHSU-1775-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Isocitrate dehydrogenase, NADP-dependentImported (EC:1.1.1.42Imported)
Gene namesi
Ordered Locus Names:TERTU_1960Imported
OrganismiTeredinibacter turnerae (strain ATCC 39867 / T7901)Imported
Taxonomic identifieri377629 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadales genera incertae sedisTeredinibacter
ProteomesiUP000009080: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi377629.TERTU_1960.

Structurei

3D structure databases

ProteinModelPortaliC5BIJ2.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni134 – 1418Substrate binding By similarity

Phylogenomic databases

eggNOGiCOG2838.
HOGENOMiHOG000240860.
KOiK00031.
OMAiEEQRIGD.
OrthoDBiEOG6DVJPP.

Family and domain databases

Gene3Di3.40.718.10. 3 hits.
InterProiIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamiPF03971. IDH. 1 hit.
[Graphical view]
PIRSFiPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsiTIGR00178. monomer_idh. 1 hit.

Sequencei

Sequence statusi: Complete.

C5BIJ2-1 [UniParc]FASTAAdd to Basket

« Hide

MSSDKPAIIY TETDEAPALA TYSLLPIVQA FAKAAGISVE TKDISLSGRV    50
IANFSDYLTA DQQQEDALAL LGELATKPEA NIIKLPNISA SVPQLQATIK 100
ELQAKGYKLP DYPADPSTEE EKSVKARYDK IKGSAVNPVL REGNSDRRAP 150
ASVKQYARKN PHSMGAWESS SKSHVSAMTD GDFYGSEQSV TVDSATTVSI 200
QLVTDAGETL VLKDSLPLQA SEIIDSSVLS KTALTAFLAE QIEDAKAQDV 250
LFSLHMKATM MKVSDPIIFG HAVKVFYNSV FDKHAATFAE LGVDANNGVG 300
DVYAKIAALP DDKRAEIEAD FAALYAERPP LAMVNSDKGI TNLHVPSDII 350
IDASMPAMIR ASGQMWGPDG KQKDTKAVIP DRCYAGVYQT TIEFCKQHGA 400
FDPTTMGTVP NVGLMAQKAE EYGSHDKTFE ISAAGKVQVV DADGTVLMEH 450
SVEPGDIFRA CQVKDAPVQD WVKLAVTRAR LSATPAVFWL DEARAHDAQL 500
IEKVKTYLQD HDTDGLDIRI LAPVEATQFS LERMKNGEDT ISVTGNVLRD 550
YLTDLFPILE LGTSAKMLSV VPLMNGGGLF ETGAGGSAPK HVEQFVQENH 600
LRWDSLGEFL ALAASFEHYG VVHSSEQAKV LADTLDKATA KFLDNNKSPS 650
RKVGELDNRG SHFYLALYWA QELAAQNADT ALQSQFTTVA EAMSAAEQAI 700
VDELNSAQGQ AVEINGYYKP EPALVSAAMR ASKTLNAIVD AI 742
Length:742
Mass (Da):80,088
Last modified:July 28, 2009 - v1
Checksum:i90FAE076B406803C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001614 Genomic DNA. Translation: ACR14526.1.
RefSeqiYP_003073446.1. NC_012997.1.

Genome annotation databases

EnsemblBacteriaiACR14526; ACR14526; TERTU_1960.
GeneIDi8211505.
KEGGittu:TERTU_1960.
PATRICi23870973. VBITerTur118718_1820.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001614 Genomic DNA. Translation: ACR14526.1 .
RefSeqi YP_003073446.1. NC_012997.1.

3D structure databases

ProteinModelPortali C5BIJ2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 377629.TERTU_1960.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACR14526 ; ACR14526 ; TERTU_1960 .
GeneIDi 8211505.
KEGGi ttu:TERTU_1960.
PATRICi 23870973. VBITerTur118718_1820.

Phylogenomic databases

eggNOGi COG2838.
HOGENOMi HOG000240860.
KOi K00031.
OMAi EEQRIGD.
OrthoDBi EOG6DVJPP.

Enzyme and pathway databases

BioCyci TTUR377629:GHSU-1775-MONOMER.

Family and domain databases

Gene3Di 3.40.718.10. 3 hits.
InterProi IPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view ]
Pfami PF03971. IDH. 1 hit.
[Graphical view ]
PIRSFi PIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsi TIGR00178. monomer_idh. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39867 / T7901.

Entry informationi

Entry nameiC5BIJ2_TERTT
AccessioniPrimary (citable) accession number: C5BIJ2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: July 9, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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