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C5BIJ2

- C5BIJ2_TERTT

UniProt

C5BIJ2 - C5BIJ2_TERTT

Protein
Submitted name:

Isocitrate dehydrogenase, NADP-dependent

Gene

TERTU_1960

Organism
Teredinibacter turnerae (strain ATCC 39867 / T7901)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (28 Jul 2009)
      Previous versions | rss
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    Functioni

    Cofactori

    Binds 1 magnesium or manganese ion per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei147 – 1471SubstrateUniRule annotation
    Sitei257 – 2571Critical for catalysis
    Metal bindingi352 – 3521Magnesium or manganeseUniRule annotation
    Sitei422 – 4221Critical for catalysisUniRule annotation
    Binding sitei549 – 5491SubstrateUniRule annotation
    Metal bindingi550 – 5501Magnesium or manganeseUniRule annotation
    Metal bindingi554 – 5541Magnesium or manganeseUniRule annotation

    GO - Molecular functioni

    1. isocitrate dehydrogenase (NADP+) activity Source: UniProtKB-EC
    2. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Keywords - Ligandi

    MagnesiumUniRule annotation, Metal-bindingUniRule annotation

    Enzyme and pathway databases

    BioCyciTTUR377629:GHSU-1775-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Isocitrate dehydrogenase, NADP-dependentImported (EC:1.1.1.42Imported)
    Gene namesi
    Ordered Locus Names:TERTU_1960Imported
    OrganismiTeredinibacter turnerae (strain ATCC 39867 / T7901)Imported
    Taxonomic identifieri377629 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadales genera incertae sedisTeredinibacter
    ProteomesiUP000009080: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi377629.TERTU_1960.

    Structurei

    3D structure databases

    ProteinModelPortaliC5BIJ2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni134 – 1418Substrate bindingUniRule annotation

    Phylogenomic databases

    eggNOGiCOG2838.
    HOGENOMiHOG000240860.
    KOiK00031.
    OMAiEEQRIGD.
    OrthoDBiEOG6DVJPP.

    Family and domain databases

    Gene3Di3.40.718.10. 3 hits.
    InterProiIPR004436. Isocitrate_DH_NADP_mono.
    IPR024084. IsoPropMal-DH-like_dom.
    [Graphical view]
    PfamiPF03971. IDH. 1 hit.
    [Graphical view]
    PIRSFiPIRSF009407. IDH_monmr. 1 hit.
    TIGRFAMsiTIGR00178. monomer_idh. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C5BIJ2-1 [UniParc]FASTAAdd to Basket

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    MSSDKPAIIY TETDEAPALA TYSLLPIVQA FAKAAGISVE TKDISLSGRV    50
    IANFSDYLTA DQQQEDALAL LGELATKPEA NIIKLPNISA SVPQLQATIK 100
    ELQAKGYKLP DYPADPSTEE EKSVKARYDK IKGSAVNPVL REGNSDRRAP 150
    ASVKQYARKN PHSMGAWESS SKSHVSAMTD GDFYGSEQSV TVDSATTVSI 200
    QLVTDAGETL VLKDSLPLQA SEIIDSSVLS KTALTAFLAE QIEDAKAQDV 250
    LFSLHMKATM MKVSDPIIFG HAVKVFYNSV FDKHAATFAE LGVDANNGVG 300
    DVYAKIAALP DDKRAEIEAD FAALYAERPP LAMVNSDKGI TNLHVPSDII 350
    IDASMPAMIR ASGQMWGPDG KQKDTKAVIP DRCYAGVYQT TIEFCKQHGA 400
    FDPTTMGTVP NVGLMAQKAE EYGSHDKTFE ISAAGKVQVV DADGTVLMEH 450
    SVEPGDIFRA CQVKDAPVQD WVKLAVTRAR LSATPAVFWL DEARAHDAQL 500
    IEKVKTYLQD HDTDGLDIRI LAPVEATQFS LERMKNGEDT ISVTGNVLRD 550
    YLTDLFPILE LGTSAKMLSV VPLMNGGGLF ETGAGGSAPK HVEQFVQENH 600
    LRWDSLGEFL ALAASFEHYG VVHSSEQAKV LADTLDKATA KFLDNNKSPS 650
    RKVGELDNRG SHFYLALYWA QELAAQNADT ALQSQFTTVA EAMSAAEQAI 700
    VDELNSAQGQ AVEINGYYKP EPALVSAAMR ASKTLNAIVD AI 742
    Length:742
    Mass (Da):80,088
    Last modified:July 28, 2009 - v1
    Checksum:i90FAE076B406803C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001614 Genomic DNA. Translation: ACR14526.1.
    RefSeqiYP_003073446.1. NC_012997.1.

    Genome annotation databases

    EnsemblBacteriaiACR14526; ACR14526; TERTU_1960.
    GeneIDi8211505.
    KEGGittu:TERTU_1960.
    PATRICi23870973. VBITerTur118718_1820.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001614 Genomic DNA. Translation: ACR14526.1 .
    RefSeqi YP_003073446.1. NC_012997.1.

    3D structure databases

    ProteinModelPortali C5BIJ2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 377629.TERTU_1960.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACR14526 ; ACR14526 ; TERTU_1960 .
    GeneIDi 8211505.
    KEGGi ttu:TERTU_1960.
    PATRICi 23870973. VBITerTur118718_1820.

    Phylogenomic databases

    eggNOGi COG2838.
    HOGENOMi HOG000240860.
    KOi K00031.
    OMAi EEQRIGD.
    OrthoDBi EOG6DVJPP.

    Enzyme and pathway databases

    BioCyci TTUR377629:GHSU-1775-MONOMER.

    Family and domain databases

    Gene3Di 3.40.718.10. 3 hits.
    InterProi IPR004436. Isocitrate_DH_NADP_mono.
    IPR024084. IsoPropMal-DH-like_dom.
    [Graphical view ]
    Pfami PF03971. IDH. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF009407. IDH_monmr. 1 hit.
    TIGRFAMsi TIGR00178. monomer_idh. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 39867 / T7901Imported.

    Entry informationi

    Entry nameiC5BIJ2_TERTT
    AccessioniPrimary (citable) accession number: C5BIJ2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3