Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Alpha amylase family protein, catalytic domain protein

Gene

NT01EI_2127

Organism
Edwardsiella ictaluri (strain 93-146)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciEICT634503:GCMY-2106-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase family protein, catalytic domain proteinImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:NT01EI_2127Imported
OrganismiEdwardsiella ictaluri (strain 93-146)Imported
Taxonomic identifieri634503 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEdwardsiella
ProteomesiUP000001485 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi634503.NT01EI_2127.

Structurei

3D structure databases

ProteinModelPortaliC5BE62.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiFNWHNAT.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

C5BE62-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKYAILAALL LPVAAGADWR SPVFPRFAAV GEGVFSASQA LAKGEAPLQL
60 70 80 90 100
YQADRCWQPS GTIRLNQTLS LMPCQGEAPR WRRFRDGRYQ ARVDTRPGTP
110 120 130 140 150
TLMLSVQDEA VQRAAAPVRP CPRWNGRPLR VPVDQAFSEG SRVRDFYSGE
160 170 180 190 200
VARVTQGTVT LQPAPGSNGL LLLESAETAG PAAFDWHNAT VYFVLVDRFA
210 220 230 240 250
NGDPSNDNSY GRQQDGMQEI GTFHGGDLRG LTGKLDYLQR LGVNVLWISS
260 270 280 290 300
PLEQIHGWVG GGSRGDFPHY AYHGYYPLDW TRLDANMGSE QDLRALVEGA
310 320 330 340 350
HRRGIRVLFD VVMNHTGYAT LADMQQYRFG ALFLQGETLR QTLGTHWSDW
360 370 380 390 400
RPGRGQTWHS FNDYIDFGNR TAWARWWGKG WIRTDIGDYD APGFDDFTLS
410 420 430 440 450
LSFLPDVKTE SSVASGLPRF YRHKPDTRAR EIPGYTPRDY LTRWLSQWVR
460 470 480 490 500
EYGIDGFRID TAKHVELAAW QQLKQQASAA LAEWKRANPQ QALDAAPFWM
510 520 530 540 550
TGEAWGHGVM RSAYYRHGFD AMINFDYQEQ AERAQACLAD IDPLWQQMAA
560 570 580 590 600
QLQDFNVLSY LSSHDTHLFR SGGSRAAELL LLAPGAVQIF YGDESGRPLG
610 620 630 640 650
PTGSDPLQGT RSDMNWQDIH GPAAAQVAHW QRLGQFRARH PAIGKGEQTT
660 670
IAMPQGYGFI RNDGRDRVMV IWAGQQE
Length:677
Mass (Da):75,945
Last modified:July 28, 2009 - v1
Checksum:i1AB79E08A8E54D62
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001600 Genomic DNA. Translation: ACR69303.1.
RefSeqiYP_002933538.1. NC_012779.2.

Genome annotation databases

EnsemblBacteriaiACR69303; ACR69303; NT01EI_2127.
KEGGieic:NT01EI_2127.
PATRICi21837222. VBIEdwIct114273_1901.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001600 Genomic DNA. Translation: ACR69303.1.
RefSeqiYP_002933538.1. NC_012779.2.

3D structure databases

ProteinModelPortaliC5BE62.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi634503.NT01EI_2127.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACR69303; ACR69303; NT01EI_2127.
KEGGieic:NT01EI_2127.
PATRICi21837222. VBIEdwIct114273_1901.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiFNWHNAT.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciEICT634503:GCMY-2106-MONOMER.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Edwardsiella ictaluri 93-146."
    Williams M.L., Gillaspy A.F., Dyer D.W., Thune R.L., Waldbieser G.C., Schuster S.C., Gipson J., Zaitshik J., Landry C., Lawrence M.L.
    Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 93-146Imported.

Entry informationi

Entry nameiC5BE62_EDWI9
AccessioniPrimary (citable) accession number: C5BE62
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: April 1, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.