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Protein

Glutamate decarboxylase

Gene

NT01EI_0906

Organism
Edwardsiella ictaluri (strain 93-146)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciEICT634503:GCMY-896-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:NT01EI_0906Imported
OrganismiEdwardsiella ictaluri (strain 93-146)Imported
Taxonomic identifieri634503 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEdwardsiella
ProteomesiUP000001485 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi634503.NT01EI_0906.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5B9L8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKGHDIHGK LLDSRFGSEA IRSAAEAHYF PLEEMREDIA FQVINDELLL
60 70 80 90 100
DGNARQNLAT FCQTWDDDYV HRLMDISINK NWIDKEEYPQ SAAIDLRCVN
110 120 130 140 150
MVADLWHAPH PADGQAVGTN TIGSSEACML GGMAMKWRWR AKRLAQGKPV
160 170 180 190 200
DKPNMVCGPV QVCWHKFARY WDIELREIPM APGKLFMDPE RMIAACDENT
210 220 230 240 250
IGVVPTFGVT YTGNYEMPDV LHKALDDLQA RTGLDIDMHI DAASGGFLAP
260 270 280 290 300
FCAPDIVWDF RLPRVKSISA SGHKFGLAPL GCGWVVWRDA ASLPDDLIFK
310 320 330 340 350
VDYLGGQVGT FAINFSRPAG QVIAQYYEFL RLGREGYAKV HTASYQVAQF
360 370 380 390 400
LAAEIARLEP YEFICNGDPQ QGIPAVCFRI PAGKELGYSL YDLSERLRLR
410 420 430 440 450
GWQVPAFALS GEMSDVVVMR IMCRRGFEMD FAQLLMDDFR AALAYLKAHP
460
AAAHIANQNS FKHS
Length:464
Mass (Da):52,006
Last modified:July 28, 2009 - v1
Checksum:iB9CC169129520B8A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001600 Genomic DNA. Translation: ACR68120.1.
RefSeqiWP_015870307.1. NC_012779.2.
YP_002932355.1. NC_012779.2.

Genome annotation databases

EnsemblBacteriaiACR68120; ACR68120; NT01EI_0906.
GeneIDi7962311.
KEGGieic:NT01EI_0906.
PATRICi21835004. VBIEdwIct114273_0819.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001600 Genomic DNA. Translation: ACR68120.1.
RefSeqiWP_015870307.1. NC_012779.2.
YP_002932355.1. NC_012779.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi634503.NT01EI_0906.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACR68120; ACR68120; NT01EI_0906.
GeneIDi7962311.
KEGGieic:NT01EI_0906.
PATRICi21835004. VBIEdwIct114273_0819.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Enzyme and pathway databases

BioCyciEICT634503:GCMY-896-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEiPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Edwardsiella ictaluri 93-146."
    Williams M.L., Gillaspy A.F., Dyer D.W., Thune R.L., Waldbieser G.C., Schuster S.C., Gipson J., Zaitshik J., Landry C., Lawrence M.L.
    Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 93-146Imported.

Entry informationi

Entry nameiC5B9L8_EDWI9
AccessioniPrimary (citable) accession number: C5B9L8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: April 29, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.