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C5B703 (C5B703_EDWI9) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Chorismate--pyruvate lyase HAMAP MF_01632
Short name=CL HAMAP MF_01632
Short name=CPL HAMAP MF_01632
EC=4.1.3.40 HAMAP MF_01632
Gene names
Name:ubiC HAMAP MF_01632
Ordered Locus Names:NT01EI_0222
OrganismEdwardsiella ictaluri (strain 93-146) [Complete proteome] [HAMAP] EMBL ACR67465.1
Taxonomic identifier634503 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Edwardsiella

Protein attributes

Sequence length168 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway By similarity. HAMAP MF_01632

Catalytic activity

Chorismate = 4-hydroxybenzoate + pyruvate. HAMAP MF_01632

Pathway

Cofactor biosynthesis; ubiquinone biosynthesis. HAMAP MF_01632

Subunit structure

Monomer By similarity. HAMAP MF_01632

Subcellular location

Cytoplasm By similarity HAMAP MF_01632.

Sequence similarities

Belongs to the ubiC family. HAMAP MF_01632

Ontologies

Keywords
   Biological processUbiquinone biosynthesis HAMAP MF_01632
   Cellular componentCytoplasm HAMAP MF_01632
   LigandPyruvate HAMAP MF_01632 EMBL ACR67465.1
   Molecular functionLyase HAMAP MF_01632 EMBL ACR67465.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processpyruvate biosynthetic process

Inferred from electronic annotation. Source: HAMAP

ubiquinone biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionchorismate lyase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Binding site351Substrate; via amide nitrogen By similarity HAMAP MF_01632
Binding site781Substrate By similarity HAMAP MF_01632
Binding site1161Substrate; via amide nitrogen By similarity HAMAP MF_01632

Sequences

Sequence LengthMass (Da)Tools
C5B703 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 24BB42437F824C36

FASTA16818,735
        10         20         30         40         50         60 
MAEYSAALAN IDWRPLADAT PPADYCSWLA EQGSMTRRLE QQCDRLQVTV LREGAVDPTQ 

        70         80         90        100        110        120 
LSDDECRQLS PSVQYWLREV ILLGDGIPWL FGRTLTPSST LEGEGEALRR LGSTPLGRYL 

       130        140        150        160 
FSGVALERES LRVGCLGLLW ARRSRLRVAG QPLLLTELFL ADAPIYGR

« Hide

References

[1]"Complete genome sequence of Edwardsiella ictaluri 93-146."
Williams M.L., Gillaspy A.F., Dyer D.W., Thune R.L., Waldbieser G.C., Schuster S.C., Gipson J., Zaitshik J., Landry C., Lawrence M.L.
Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001600 Genomic DNA. Translation: ACR67465.1.
RefSeqYP_002931700.1. NC_012779.1.

3D structure databases

ProteinModelPortalC5B703.
ModBaseSearch...

Protein-protein interaction databases

STRINGC5B703.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7958810.
GenomeReviewsGene locus NT01EI_0222 in contig CP001600_GR.
KEGGeic:NT01EI_0222.
PATRIC21833722. VBIEdwIct114273_0198.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAGRTVIPQ.
ProtClustDBCLSK2812674.

Family and domain databases

HAMAPMF_01632. UbiC.
[Tree]
InterProIPR007440. Chorismate--pyruvate_lyase.
[Graphical view]
KOK03181.
PfamPF04345. Chor_lyase. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5B703_EDWI9
AccessionPrimary (citable) accession number: C5B703
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info