C5AY86 (C5AY86_METEA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative ATP-dependent DNA ligase EMBL ACS41185.1
EC=6.5.1.1 EMBL ACS41185.1

Gene names

Ordered Locus Names:

MexAM1_META1p3448 EMBL ACS41185.1

Organism

Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) [Complete proteome] [HAMAP] EMBL ACS41185.1

Taxonomic identifier

272630 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Methylobacteriaceae › Methylobacterium › Methylobacterium extorquens group › Methylobacterium extorquens

Protein attributes

Sequence length	635 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACS41185.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C5AY86 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: D3AE61A8B7D11E11	FASTA	635	69,985
	10 20 30 40 50 60 MNDFAHLLDR LAYEPRRNAK LRLLQDFFAG TPDPERGWAL AAMTGGLTFR EAKPALIRGL 70 80 90 100 110 120 VEERVDPVLF SLSHNYVGDL AETTALIWPG PSESPDGSPS PRGRGEGRDD LVVGATSLKG 130 140 150 160 170 180 DGEGAAQEEA ASAQPPHRRL PARSANDEVG RALSPQAGRG DPPGPGHNNP PPSVPTLAEV 190 200 210 220 230 240 VETLASTPKR ELPQHLAHWL DALDETGRWA LLKLVTGNLR VGVSARLAKT AVGALGGHEA 250 260 270 280 290 300 DAVEEVWHGL KPPYTELFAW VEGRGERPES RNPAPFRPPM LSHPVEEFED LDKLEPEAFS 310 320 330 340 350 360 AEWKWDGIRV QLAGGRDGQG RQVQKVYSRT GEDISDAFPD LAEAITFDGA IDGELLILRE 370 380 390 400 410 420 GRVQSFNVLQ QRLNRKAVTG KLLEEFPAHV RAYDVLAAEG EDLRPLPFAE RRPRLEALVR 430 440 450 460 470 480 RLDHARIDLS PLVPFTSWDE VAAARADPAS AGAGADADAI EGVMLKRLNS PYLPGRPKGP 490 500 510 520 530 540 WWKWKREPYV VDAVMMYAQR GHGKRSSFYS DYTFGCWREG AEGEELVPVG KAYHGFTDAE 550 560 570 580 590 600 LQKLDRYVRN HTTKRFGPVR EVAYGREAGL VLEIAFEGVQ RSTRHKSGVA MRFPRVSRIR 610 620 630 WDKPAAEADR VDVLERILAR GEREVAPGAA MEASE

References

[1]

"Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources." Vuilleumier S., Chistoserdova L., Lee M.C., Bringel F., Lajus A., Zhou Y., Gourion B., Barbe V., Chang J., Cruveiller S., Dossat C., Gillett W., Gruffaz C., Haugen E., Hourcade E., Levy R., Mangenot S., Muller E. , Nadalig T., Pagni M., Penny C., Peyraud R., Robinson D.G., Roche D., Rouy Z., Saenampechek C., Salvignol G., Vallenet D., Wu Z., Marx C.J., Vorholt J.A., Olson M.V., Kaul R., Weissenbach J., Medigue C., Lidstrom M.E. PLoS ONE 4:E5584-E5584(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 14718 / DSM 1338 / AM1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001510 Genomic DNA. Translation: ACS41185.1.
RefSeq	YP_002964462.1. NC_012808.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	272630.MexAM1_META1p3448.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACS41185; ACS41185; MexAM1_META1p3448.
GeneID	7993324.
KEGG	mea:Mex_1p3448.
PATRIC	22512636. VBIMetExt101010_3379.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000036007.
KO	K01971.
OMA	KHAKPAL.
ProtClustDB	CLSK2331597.
Enzyme and pathway databases
BioCyc	MEXT272630:GBY6-3284-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C5AY86_METEA

Accession

Primary (citable) accession number: C5AY86

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	May 29, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)