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Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene

MexAM1_META1p3448

Organism
Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMEXT272630:GBY6-3284-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:MexAM1_META1p3448Imported
OrganismiMethylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1)Imported
Taxonomic identifieri272630 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium
ProteomesiUP000009081 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272630.MexAM1_META1p3448.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiEYPIHLR.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C5AY86-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDFAHLLDR LAYEPRRNAK LRLLQDFFAG TPDPERGWAL AAMTGGLTFR
60 70 80 90 100
EAKPALIRGL VEERVDPVLF SLSHNYVGDL AETTALIWPG PSESPDGSPS
110 120 130 140 150
PRGRGEGRDD LVVGATSLKG DGEGAAQEEA ASAQPPHRRL PARSANDEVG
160 170 180 190 200
RALSPQAGRG DPPGPGHNNP PPSVPTLAEV VETLASTPKR ELPQHLAHWL
210 220 230 240 250
DALDETGRWA LLKLVTGNLR VGVSARLAKT AVGALGGHEA DAVEEVWHGL
260 270 280 290 300
KPPYTELFAW VEGRGERPES RNPAPFRPPM LSHPVEEFED LDKLEPEAFS
310 320 330 340 350
AEWKWDGIRV QLAGGRDGQG RQVQKVYSRT GEDISDAFPD LAEAITFDGA
360 370 380 390 400
IDGELLILRE GRVQSFNVLQ QRLNRKAVTG KLLEEFPAHV RAYDVLAAEG
410 420 430 440 450
EDLRPLPFAE RRPRLEALVR RLDHARIDLS PLVPFTSWDE VAAARADPAS
460 470 480 490 500
AGAGADADAI EGVMLKRLNS PYLPGRPKGP WWKWKREPYV VDAVMMYAQR
510 520 530 540 550
GHGKRSSFYS DYTFGCWREG AEGEELVPVG KAYHGFTDAE LQKLDRYVRN
560 570 580 590 600
HTTKRFGPVR EVAYGREAGL VLEIAFEGVQ RSTRHKSGVA MRFPRVSRIR
610 620 630
WDKPAAEADR VDVLERILAR GEREVAPGAA MEASE
Length:635
Mass (Da):69,985
Last modified:July 28, 2009 - v1
Checksum:iD3AE61A8B7D11E11
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001510 Genomic DNA. Translation: ACS41185.1.
RefSeqiWP_012753274.1. NC_012808.1.

Genome annotation databases

EnsemblBacteriaiACS41185; ACS41185; MexAM1_META1p3448.
KEGGimea:Mex_1p3448.
PATRICi22512636. VBIMetExt101010_3379.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001510 Genomic DNA. Translation: ACS41185.1.
RefSeqiWP_012753274.1. NC_012808.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272630.MexAM1_META1p3448.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACS41185; ACS41185; MexAM1_META1p3448.
KEGGimea:Mex_1p3448.
PATRICi22512636. VBIMetExt101010_3379.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiEYPIHLR.
OrthoDBiEOG6Q8HXT.

Enzyme and pathway databases

BioCyciMEXT272630:GBY6-3284-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 14718 / DSM 1338 / AM1Imported.

Entry informationi

Entry nameiC5AY86_METEA
AccessioniPrimary (citable) accession number: C5AY86
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: July 22, 2015
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.