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C5AY86 (C5AY86_METEA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length635 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACS41185.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C5AY86 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: D3AE61A8B7D11E11

FASTA63569,985
        10         20         30         40         50         60 
MNDFAHLLDR LAYEPRRNAK LRLLQDFFAG TPDPERGWAL AAMTGGLTFR EAKPALIRGL 

        70         80         90        100        110        120 
VEERVDPVLF SLSHNYVGDL AETTALIWPG PSESPDGSPS PRGRGEGRDD LVVGATSLKG 

       130        140        150        160        170        180 
DGEGAAQEEA ASAQPPHRRL PARSANDEVG RALSPQAGRG DPPGPGHNNP PPSVPTLAEV 

       190        200        210        220        230        240 
VETLASTPKR ELPQHLAHWL DALDETGRWA LLKLVTGNLR VGVSARLAKT AVGALGGHEA 

       250        260        270        280        290        300 
DAVEEVWHGL KPPYTELFAW VEGRGERPES RNPAPFRPPM LSHPVEEFED LDKLEPEAFS 

       310        320        330        340        350        360 
AEWKWDGIRV QLAGGRDGQG RQVQKVYSRT GEDISDAFPD LAEAITFDGA IDGELLILRE 

       370        380        390        400        410        420 
GRVQSFNVLQ QRLNRKAVTG KLLEEFPAHV RAYDVLAAEG EDLRPLPFAE RRPRLEALVR 

       430        440        450        460        470        480 
RLDHARIDLS PLVPFTSWDE VAAARADPAS AGAGADADAI EGVMLKRLNS PYLPGRPKGP 

       490        500        510        520        530        540 
WWKWKREPYV VDAVMMYAQR GHGKRSSFYS DYTFGCWREG AEGEELVPVG KAYHGFTDAE 

       550        560        570        580        590        600 
LQKLDRYVRN HTTKRFGPVR EVAYGREAGL VLEIAFEGVQ RSTRHKSGVA MRFPRVSRIR 

       610        620        630 
WDKPAAEADR VDVLERILAR GEREVAPGAA MEASE 

« Hide

References

[1]"Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources."
Vuilleumier S., Chistoserdova L., Lee M.-C., Bringel F., Lajus A., Zhou Y., Gourion B., Barbe V., Chang J., Cruveiller S., Dossat C., Gillett W., Gruffaz C., Haugen E., Hourcade E., Levy R., Mangenot S., Muller E. expand/collapse author list , Nadalig T., Pagni M., Penny C., Peyraud R., Robinson D.G., Roche D., Rouy Z., Saenampechek C., Salvignol G., Vallenet D., Wu Z., Marx C.J., Vorholt J.A., Olson M.V., Kaul R., Weissenbach J., Medigue C., Lidstrom M.E.
PLoS ONE 4:E5584-E5584(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 14718 / DSM 1338 / AM1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001510 Genomic DNA. Translation: ACS41185.1.
RefSeqYP_002964462.1. NC_012808.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272630.MexAM1_META1p3448.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACS41185; ACS41185; MexAM1_META1p3448.
GeneID7993324.
KEGGmea:Mex_1p3448.
PATRIC22512636. VBIMetExt101010_3379.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAKHAKPAL.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycMEXT272630:GBY6-3284-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC5AY86_METEA
AccessionPrimary (citable) accession number: C5AY86
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: July 9, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)